RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
VARS-228ENST00000495010 SPTA1P02549 2419 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 C2CD4BA6NLJ0 364 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 RHPN2P1A8MT19 583 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 CREB3O43889 395 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 GADD45BO75293 160 aaPredicted RBP14.33□□□□□ -0.12
VARS-228ENST00000495010 CPNE6O95741 557 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 KRT3P12035 628 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 UCHL3P15374 230 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 KIAA1024LP59773 190 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 SERINC3Q13530 473 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 BECN1Q14457 450 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
VARS-228ENST00000495010 CYTH1Q15438 398 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 CAMK4Q16566 473 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
VARS-228ENST00000495010 SCYL2Q6P3W7 929 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 BORAQ6PGQ7 559 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 DTX1Q86Y01 620 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 SLITRK4Q8IW52 837 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 MLKLQ8NB16 471 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 PLA2G15Q8NCC3 412 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 JOSD2Q8TAC2 188 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 EPS8L1Q8TE68 723 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 OR1E3Q8WZA6 343 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 NTAN1Q96AB6 310 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 SELENOOQ9BVL4 669 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 KLC2Q9H0B6 622 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 TMEM168Q9H0V1 697 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 ADNPQ9H2P0 1102 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 CYP4F12Q9HCS2 524 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 MRPL40Q9NQ50 206 aaKnown RBP14.33□□□□□ -0.12
VARS-228ENST00000495010 LHX3Q9UBR4 397 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 SCN8AQ9UQD0 1980 aa14.33□□□□□ -0.12
VARS-228ENST00000495010 UNC13CQ8NB66 2214 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 TSPAN11A1L157 253 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 CFAP69A5D8W1 941 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 TMEM202A6NGA9 273 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 F8VZ95 297 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 PDE2AO00408 941 aaPredicted RBP14.32□□□□□ -0.12
VARS-228ENST00000495010 TNFRSF10CO14798 259 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 RECQL5O94762 991 aaPredicted RBP14.32□□□□□ -0.12
VARS-228ENST00000495010 PRKCGP05129 697 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 ELFN1P0C7U0 828 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 GPD1P21695 349 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 MMP8P22894 467 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 SERPINA4P29622 427 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 ALDH4A1P30038 563 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 MMP12P39900 470 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 HDAC4P56524 1084 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 CLCA4Q14CN2 919 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 PTRH1Q86Y79 214 aaKnown RBP14.32□□□□□ -0.12
VARS-228ENST00000495010 CAMK1DQ8IU85 385 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 PYROXD2Q8N2H3 581 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 IL22RA1Q8N6P7 574 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 CCDC112Q8NEF3 446 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 SLC30A5Q8TAD4 765 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 HTR3CQ8WXA8 447 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 CENPIQ92674 756 aaPredicted RBP14.32□□□□□ -0.12
VARS-228ENST00000495010 FUBP1Q96AE4 644 aaKnown RBP14.32□□□□□ -0.12
VARS-228ENST00000495010 TAAR9Q96RI9 348 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 TUBGCP5Q96RT8 1024 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 FUCA2Q9BTY2 467 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 NOL6Q9H6R4 1146 aaKnown RBP14.32□□□□□ -0.12
VARS-228ENST00000495010 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 RDH14Q9HBH5 336 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 FGF22Q9HCT0 170 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 DONSONQ9NYP3 566 aa14.32□□□□□ -0.12
VARS-228ENST00000495010 LRP4O75096 1905 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 ANKRD62A6NC57 917 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 HGSO14964 777 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 TEX33O43247 280 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 GFPT2O94808 682 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 NTRK1P04629 796 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 CYP1A1P04798 512 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 CCL4P13236 92 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 DESP17661 470 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 WT1P19544 449 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 STAT1P42224 750 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 OR1D5P58170 312 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 POLR2LP62875 67 aaKnown RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 B4GALNT1Q00973 533 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 CDR2Q01850 454 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 C16orf72Q14CZ0 275 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 CLPPQ16740 277 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 HSP90AA4PQ58FG1 418 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 MIIPQ5JXC2 388 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 DPY19L2P1Q6NXN4 242 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 TMPRSS9Q7Z410 1059 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 SFTPA2Q8IWL1 248 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 ZNF564Q8TBZ8 553 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 ZDHHC1Q8WTX9 485 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 SLC20A1Q8WUM9 679 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 NAA15Q9BXJ9 866 aaKnown RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 GSDMCQ9BYG8 508 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 WDR26Q9H7D7 661 aa14.31□□□□□ -0.12
VARS-228ENST00000495010 SUDS3Q9H7L9 328 aaPredicted RBP14.31□□□□□ -0.12
VARS-228ENST00000495010 AHCTF1Q8WYP5 2266 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms