RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ART1P52961 327 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 RARSP54136 660 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 GAS1P54826 345 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SELENOVP59797 346 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SEC61A1P61619 476 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SLC18A2Q05940 514 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 CRYZQ08257 329 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 GOLGA8DPQ0D2H9 430 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 EPS8Q12929 822 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 GAGE1Q13065 139 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 GAGE4Q13068 117 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 WTAPQ15007 396 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 PSMD6Q15008 389 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SHBQ15464 509 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 DUSP6Q16828 381 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SPECC1Q5M775 1068 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 CFAP58Q5T655 872 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 UBAP2Q5T6F2 1119 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SERTAD4-AS1Q5TG53 156 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 CAPRIN2Q6IMN6 1127 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 TMEM71Q6P5X7 295 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 CPLX2Q6PUV4 134 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 TMCO3Q6UWJ1 677 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 ATF7IPQ6VMQ6 1270 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 FAM83HQ6ZRV2 1179 aaPredicted RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 PXKQ7Z7A4 578 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 TBC1D26Q86UD7 250 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 FAM160B2Q86V87 743 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 GLCCI1Q86VQ1 547 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SPATA2LQ8IUW3 424 aaPredicted RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 RBFAQ8N0V3 343 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 TEX45Q8NA69 505 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 C9orf106Q8NAJ2 232 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SCCPDHQ8NBX0 429 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 ENGASEQ8NFI3 743 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 RASSF8Q8NHQ8 419 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 ETNPPLQ8TBG4 499 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 MAGEC3Q8TD91 643 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 INPP5DQ92835 1189 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 MOAP1Q96BY2 351 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 RTP4Q96DX8 246 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 KIF1BPQ96EK5 621 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SAAL1Q96ER3 474 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 TXNDC15Q96J42 360 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 FEM1CQ96JP0 617 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 DUX5Q96PT3 197 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 NR1H4Q96RI1 486 aaPredicted RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SIN3AQ96ST3 1273 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 H2AFJQ9BTM1 129 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 CENPOQ9BU64 300 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 ITPAQ9BY32 194 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 POLDIP3Q9BY77 421 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 LHPPQ9H008 270 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 RSPH9Q9H1X1 276 aaPredicted RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 TTYH1Q9H313 450 aaPredicted RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 BRF2Q9HAW0 419 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 WDR6Q9NNW5 1121 aaKnown RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 CD93Q9NPY3 652 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SH3GLB2Q9NR46 395 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 HAUS2Q9NVX0 235 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 BABAM1Q9NWV8 329 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 ANKRD10Q9NXR5 420 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 MPP6Q9NZW5 540 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 NFKBIL1Q9UBC1 381 aaPredicted RBP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 NAALADL1Q9UQQ1 740 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.47□□□□□ -2.01
LMNB1-207ENST00000494185 SNX8Q9Y5X2 465 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 LYVE1Q9Y5Y7 322 aa2.47□□□□□ -2.01
LMNB1-207ENST00000494185 RSF1Q96T23 1441 aaPredicted RBP2.46□□□□□ -2.02
LMNB1-207ENST00000494185 TEX13CA0A0J9YWL9 993 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 SYNDIG1LA6NDD5 238 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 AGAP14A8MT82 685 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 P4HA2O15460 535 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 SMAD6O43541 496 aaKnown RBP2.46□□□□□ -2.02
LMNB1-207ENST00000494185 TNFSF14O43557 240 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 ATP2C2O75185 946 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 STARD3NLO95772 234 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 HOXB5P09067 269 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 NR2F1P10589 423 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 FGF3P11487 239 aaPredicted RBP2.46□□□□□ -2.02
LMNB1-207ENST00000494185 FCGR1AP12314 374 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 COX7A2P14406 83 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 AKR1B1P15121 316 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 PORP16435 677 aaPredicted RBP2.46□□□□□ -2.02
LMNB1-207ENST00000494185 CDH2P19022 906 aaPredicted RBP2.46□□□□□ -2.02
LMNB1-207ENST00000494185 IL11P20809 199 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 GNLYP22749 145 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 MCCP23508 829 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 TM4SF1P30408 202 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 FMO4P31512 558 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 PSMB10P40306 273 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 CENPAP49450 140 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 PCYT1AP49585 367 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 UFM1P61960 85 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 KRT83P78385 493 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 ROR1Q01973 937 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 CYP4A11Q02928 519 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 CALD1Q05682 793 aaKnown RBP2.46□□□□□ -2.02
LMNB1-207ENST00000494185 FAM27E3Q08E93 113 aa2.46□□□□□ -2.02
LMNB1-207ENST00000494185 SLC39A14Q15043 492 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms