RNA–Protein interactions for RNA: ENST00000485943.1

USP40-216, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-216ENST00000485943 HACD1B0YJ81 288 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PATE3B3GLJ2 98 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 YKT6O15498 198 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PJA2O43164 708 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 KIF5CO60282 957 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ICMTO60725 284 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 JCHAINP01591 159 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ITGAVP06756 1048 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CTSLP07711 333 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ALPPL2P10696 532 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PRLRP16471 622 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CTNNA1P35221 906 aaKnown RBP8.1□□□□□ -1.11
USP40-216ENST00000485943 DRD3P35462 400 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 GRIA4P48058 902 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CSNK1EP49674 416 aaKnown RBP8.1□□□□□ -1.11
USP40-216ENST00000485943 CCT8P50990 548 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
USP40-216ENST00000485943 GBE1Q04446 702 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 SLC10A7Q0GE19 358 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 GALNT2Q10471 571 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 GRIK2Q13002 908 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CLN3Q13286 438 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 BIRC2Q13490 618 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 TCEAL1Q15170 157 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CYTH1Q15438 398 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PCSK7Q16549 785 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 LRRC73Q5JTD7 316 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 STPG1Q5TH74 334 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 AGBL4Q5VU57 503 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 MFSD7Q6UXD7 560 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ARHGAP36Q6ZRI8 547 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PARS2Q7L3T8 475 aaKnown RBP8.1□□□□□ -1.11
USP40-216ENST00000485943 GSTA5Q7RTV2 222 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PID1Q7Z2X4 250 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 NT5DC3Q86UY8 548 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 TRIM69Q86WT6 500 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CAMK1DQ8IU85 385 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ARHGAP12Q8IWW6 846 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ZNF295-AS1Q8N0V1 137 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 TRIM44Q96DX7 344 aaPredicted RBP8.1□□□□□ -1.11
USP40-216ENST00000485943 SLC6A18Q96N87 628 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PPP1R2P1Q96PQ5 205 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PSKH2Q96QS6 385 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 SLC17A9Q9BYT1 436 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 OSBPL8Q9BZF1 889 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 KLC2Q9H0B6 622 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 TM9SF3Q9HD45 589 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ZNF212Q9UDV6 495 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 RSPH14Q9UHP6 348 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PHTF1Q9UMS5 762 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 NENFQ9UMX5 172 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 NEU3Q9UQ49 428 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ANKRD6Q9Y2G4 727 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 MFHAS1Q9Y4C4 1052 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 PCDHA3Q9Y5H8 950 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 CHD5Q8TDI0 1954 aa8.1□□□□□ -1.11
USP40-216ENST00000485943 LNP1A1A4G5 178 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 TTC24A2A3L6 582 aaPredicted RBP8.09□□□□□ -1.11
USP40-216ENST00000485943 IGLON5A6NGN9 336 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 A8MX80 341 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 E7EVH7 732 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 APOC4-APOC2K7ER74 178 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 KCNK1O00180 336 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 AP1G1O43747 822 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 MAFKO60675 156 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 SOCS5O75159 536 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PAK4O96013 591 aaPredicted RBP8.09□□□□□ -1.11
USP40-216ENST00000485943 APOC2P02655 101 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 THEGLP0DJG4 465 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CTSEP14091 401 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 KELP23276 732 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CD86P42081 329 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CDKN2BP42772 138 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PTGIRP43119 386 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CSNK1DP48730 415 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 METAP1P53582 386 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 EIF3EP60228 445 aaKnown RBP8.09□□□□□ -1.11
USP40-216ENST00000485943 PPP2CBP62714 309 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PPP2CAP67775 309 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PRR20EP86478 221 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PRR20CP86479 221 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PRR20DP86480 221 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PRR20BP86481 221 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PRR20AP86496 221 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CCDC173Q0VFZ6 552 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 OVGP1Q12889 678 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PPP2R5EQ16537 467 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 UGP2Q16851 508 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CCDC157Q569K6 752 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 PIP5KL1Q5T9C9 394 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 NPNTQ6UXI9 565 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 DNAJC14Q6Y2X3 702 aaPredicted RBP8.09□□□□□ -1.11
USP40-216ENST00000485943 ARHGEF18Q6ZSZ5 1173 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CYP4V2Q6ZWL3 525 aaPredicted RBP8.09□□□□□ -1.11
USP40-216ENST00000485943 KDELC2Q7Z4H8 507 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 CPNE8Q86YQ8 564 aa8.09□□□□□ -1.11
USP40-216ENST00000485943 DCP2Q8IU60 420 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms