RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TTLL3Q9Y4R7 772 aa10.53□□□□□ -0.72
CPSF4-212ENST00000482251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.72
CPSF4-212ENST00000482251 ACACAQ13085 2346 aa10.52□□□□□ -0.72
CPSF4-212ENST00000482251 A0A0U1RQS6 177 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 GOLGA6CA6NDK9 693 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 GOLGA6BA6NDN3 693 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 TRAFD1O14545 582 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-212ENST00000482251 OPA1O60313 960 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 BRINP1O60477 761 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 ANXA6P08133 673 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 GOLGA6DP0CG33 693 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 TGM2P21980 687 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 HTR1BP28222 390 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 MMP13P45452 471 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 RENBPP51606 427 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 SUOXP51687 545 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 YPEL5P62699 121 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 TRAF2Q12933 501 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 DPYSL3Q14195 570 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 NFATC4Q14934 902 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 ACOX1Q15067 660 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 NR0B2Q15466 257 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
CPSF4-212ENST00000482251 PERM1Q5SV97 790 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 FAM182AQ5T1J6 154 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 NCBP2-AS2Q69YL0 99 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 SPECC1LQ69YQ0 1117 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 LIPIQ6XZB0 460 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 DPPA4Q7L190 304 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 SLC35F3Q8IY50 421 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 PELI3Q8N2H9 469 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 DCBLD1Q8N8Z6 715 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 KYQ8NBH2 561 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 HCAR2Q8TDS4 363 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 NSMCE1Q8WV22 266 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 BTN2A2Q8WVV5 523 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 CTNNBL1Q8WYA6 563 aaPredicted RBP10.52□□□□□ -0.73
CPSF4-212ENST00000482251 RFFLQ8WZ73 363 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 ZNF599Q96NL3 588 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 MGME1Q9BQP7 344 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 APOOQ9BUR5 198 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 ABCG4Q9H172 646 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 TSPY26PQ9H489 355 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 NT5MQ9NPB1 228 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 MRPL40Q9NQ50 206 aaKnown RBP10.52□□□□□ -0.73
CPSF4-212ENST00000482251 SPTLC3Q9NUV7 552 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 GOLGA6AQ9NYA3 693 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 DKK4Q9UBT3 224 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 DOLKQ9UPQ8 538 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 ADAMTS20P59510 1910 aa10.52□□□□□ -0.73
CPSF4-212ENST00000482251 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 ZFYVE26Q68DK2 2539 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 COL27A1Q8IZC6 1860 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CBFA2T2O43439 604 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 TLX3O43711 291 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 MFAP3LO75121 409 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CSO75390 466 aaKnown RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 PROSCO94903 275 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 MPOP05164 745 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CTSEP14091 401 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CTPS1P17812 591 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 GM2AP17900 193 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CR2P20023 1033 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 IL4RP24394 825 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 DUSP3P51452 185 aaPredicted RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 HK3P52790 923 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 SRP54P61011 504 aaKnown RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 E2F1Q01094 437 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 ITKQ08881 620 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 MTM1Q13496 603 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 TRIM14Q14142 442 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CNGA3Q16281 694 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 SLC18A3Q16572 532 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 C6orf132Q5T0Z8 1188 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 MARC1Q5VT66 337 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 TSPAN33Q86UF1 283 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 BBS5Q8N3I7 341 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 KCTD6Q8NC69 237 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 FUBP1Q96AE4 644 aaKnown RBP10.51□□□□□ -0.73
CPSF4-212ENST00000482251 NUS1Q96E22 293 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 WDR92Q96MX6 357 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 SMIM14Q96QK8 99 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 NUDCD1Q96RS6 583 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 DNAJC7Q99615 494 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 FGF22Q9HCT0 170 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 ABHD10Q9NUJ1 306 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 EVA1BQ9NVM1 165 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 GULP1Q9UBP9 304 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 MOSPD1Q9UJG1 213 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 CSNK1G3Q9Y6M4 447 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 ATRXP46100 2492 aa10.51□□□□□ -0.73
CPSF4-212ENST00000482251 DSPP15924 2871 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 LOC400499M0QZD8 3231 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 TMEM202A6NGA9 273 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 NPIPB15A6NHN6 443 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 LMO7DNF2Z398 122 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 CACNB4O00305 520 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms