RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TSHRP16473 764 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 CASP14P31944 242 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 ARHGAP25P42331 645 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 ARHGEF7Q14155 803 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 IFI16Q16666 785 aaKnown RBP11.51□□□□□ -0.57
CCM2-213ENST00000480658 CAMK1DQ8IU85 385 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 KCTD6Q8NC69 237 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 MDM1Q8TC05 714 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 FAM71BQ8TC56 605 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 CCDC97Q96F63 343 aaPredicted RBP11.51□□□□□ -0.57
CCM2-213ENST00000480658 ZNF578Q96N58 590 aaPredicted RBP11.51□□□□□ -0.57
CCM2-213ENST00000480658 DNAJC7Q99615 494 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 WDR26Q9H7D7 661 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 PCDH18Q9HCL0 1135 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 LUC7LQ9NQ29 371 aaKnown RBP11.51□□□□□ -0.57
CCM2-213ENST00000480658 UCKL1Q9NWZ5 548 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 GPSM3Q9Y4H4 160 aa11.51□□□□□ -0.57
CCM2-213ENST00000480658 FRYQ5TBA9 3013 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 FAM149AA5PLN7 773 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 TRAFD1O14545 582 aaPredicted RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 INSIG1O15503 277 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 HTRA2O43464 458 aaPredicted RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 MAFKO60675 156 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 PROSCO94903 275 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 CPP00450 1065 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 TNFP01375 233 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 TMEM253P0C7T8 217 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 ZNF30P17039 623 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 IL1R2P27930 398 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 TEAD1P28347 426 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 ABCG1P45844 678 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 UCNP55089 124 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 ERVPABLB-1P60509 514 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 RPL26P61254 145 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 CYP4F3Q08477 520 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 EIF3IQ13347 325 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 INPP5AQ14642 412 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 WSCD2Q2TBF2 565 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 LRRC73Q5JTD7 316 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 ZFYVE27Q5T4F4 411 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 ARMC12Q5T9G4 340 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 IGF2-ASQ6U949 168 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 RBM44Q6ZP01 1051 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 OR56A4Q8NGH8 313 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 SNIP1Q8TAD8 396 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 KIAA1524Q8TCG1 905 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 VOPP1Q96AW1 172 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 CCDC42Q96M95 316 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 APOOQ9BUR5 198 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 LRRC61Q9BV99 259 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 TRIM7Q9C029 511 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 XPO4Q9C0E2 1151 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 PHPT1Q9NRX4 125 aaPredicted RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 RPL26L1Q9UNX3 145 aaKnown RBP11.5□□□□□ -0.57
CCM2-213ENST00000480658 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
CCM2-213ENST00000480658 RECQL5O94762 991 aaPredicted RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 PCCBP05166 539 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 GIMD1P0DJR0 217 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 MYCLP1P12525 358 aaPredicted RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 PNLIPP16233 465 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 CR2P20023 1033 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 CCNCP24863 283 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 VIPR1P32241 457 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 GARSP41250 739 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 SLC1A1P43005 524 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 ADKP55263 362 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 PCBP4P57723 403 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 SRP54P61011 504 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 SLC10A7Q0GE19 358 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 GALNT2Q10471 571 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 EIF2B5Q13144 721 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 ACOX1Q15067 660 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 PAFAH1B3Q15102 231 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 DEFB133Q30KQ1 61 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 ZNF542PQ5EBM4 170 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 CDCP2Q5VXM1 449 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 ALG1LQ6GMV1 187 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 ENPP7Q6UWV6 458 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 LIPIQ6XZB0 460 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 TEX26Q8N6G2 289 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 PDCD6IPQ8WUM4 868 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 FGF11Q92914 225 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 NUS1Q96E22 293 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 SCRN2Q96FV2 425 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 TSGA13Q96PP4 275 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 RBM15Q96T37 977 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCM2-213ENST00000480658 BRD8Q9H0E9 1235 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 MBNL1Q9NR56 388 aaKnown RBP11.49□□□□□ -0.57
CCM2-213ENST00000480658 THSD1Q9NS62 852 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 ABHD10Q9NUJ1 306 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 INTUQ9ULD6 942 aa11.49□□□□□ -0.57
CCM2-213ENST00000480658 RAXQ9Y2V3 346 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms