RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KDELR3O43731 214 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 LIG3P49916 1009 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 OR1D5P58170 312 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 RHOAP61586 193 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 C17orf82Q86X59 251 aaPredicted RBP20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 PLA2G15Q8NCC3 412 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 TMEM35BQ8NCS4 154 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 HCAR2Q8TDS4 363 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 FUBP1Q96AE4 644 aaKnown RBP20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 C18orf8Q96DM3 657 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 SLC45A3Q96JT2 553 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 LRRC4CQ9HCJ2 640 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 MRPL40Q9NQ50 206 aaKnown RBP20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 AJAP1Q9UKB5 411 aaPredicted RBP20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 B3GALT1Q9Y5Z6 326 aa20.37■□□□□ 0.85
PDLIM1-202ENST00000477757 ITPR2Q14571 2701 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 TNFRSF10CO14798 259 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 BUB1O43683 1085 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 PIGNO95427 931 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 BMP6P22004 513 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 KELP23276 732 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 CLCN1P35523 988 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 CD97P48960 835 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 MAZP56270 477 aaKnown RBP20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 TRA2AQ13595 282 aaKnown RBP eCLIP20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 UGP2Q16851 508 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 INO80DQ53TQ3 878 aaPredicted RBP20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 ERAP2Q6P179 960 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 AGBL5Q8NDL9 886 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 CCL4L1Q8NHW4 92 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 ART4Q93070 314 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 TMEM59LQ9UK28 342 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 TEP1Q99973 2627 aaKnown RBP20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 ICE1Q9Y2F5 2266 aa20.36■□□□□ 0.85
PDLIM1-202ENST00000477757 FAM72CH0Y354 149 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 INSIG1O15503 277 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 RAD1O60671 282 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 LIMK2P53671 638 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 FAM72AQ5TYM5 149 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 FAM72DQ6L9T8 149 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 GBP6Q6ZN66 633 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 ARCQ7LC44 396 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 FAM72BQ86X60 149 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 TBC1D31Q96DN5 1066 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 TIGD1Q96MW7 591 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 NCAPGQ9BPX3 1015 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 ASPSCR1Q9BZE9 553 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 DAAM1Q9Y4D1 1078 aa20.35■□□□□ 0.85
PDLIM1-202ENST00000477757 RHPN2P1A8MT19 583 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 GOLGA8SH3BPF8 625 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 ZW10O43264 779 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 LRIG2O94898 1065 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 HOXC4P09017 264 aaPredicted RBP20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 PNMA6AP0CW24 399 aaPredicted RBP20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 CD1CP29017 333 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 ALDH4A1P30038 563 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 ADRA1BP35368 520 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 STX17P56962 302 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 CDC20Q12834 499 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 PAK1Q13153 545 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 EXOC3L4Q17RC7 722 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 TSR1Q2NL82 804 aaKnown RBP20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 LACTB2Q53H82 288 aaPredicted RBP20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 ATCAYQ86WG3 371 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 NETO2Q8NC67 525 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 OR4D9Q8NGE8 314 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 ABHD17AQ96GS6 310 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 CYP4F12Q9HCS2 524 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 LHX3Q9UBR4 397 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 ATP8A1Q9Y2Q0 1164 aa20.34■□□□□ 0.85
PDLIM1-202ENST00000477757 CENPEQ02224 2701 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 ARHGEF17Q96PE2 2063 aaPredicted RBP20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 GTPBP10A4D1E9 387 aaKnown RBP20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 FOXN3O00409 490 aaPredicted RBP20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 NKX2-8O15522 239 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 DUX1O43812 170 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 PRKAR1AP10644 381 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 THRAP10827 490 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 GPR3P46089 330 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 ATP11AP98196 1134 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 GRM3Q14832 879 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 RAB6CQ53S08 254 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 C2CD6Q53TS8 623 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 HIST2H2BCQ6DN03 193 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 BRAT1Q6PJG6 821 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 FAM71AQ8IYT1 594 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 EXOC2Q96KP1 924 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 RAB6CQ9H0N0 254 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 SUV39H2Q9H5I1 410 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 NOL6Q9H6R4 1146 aaKnown RBP20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 GPN2Q9H9Y4 310 aaPredicted RBP20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 SIX2Q9NPC8 291 aa20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 SPATS2LQ9NUQ6 558 aaKnown RBP20.33■□□□□ 0.85
PDLIM1-202ENST00000477757 CREBBPQ92793 2442 aa20.33■□□□□ 0.84
PDLIM1-202ENST00000477757 PRSS38A1L453 326 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 CFAP69A5D8W1 941 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 B4E171 279 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 RECQL5O94762 991 aaPredicted RBP20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 CCNB1P14635 433 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 PON1P27169 355 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms