RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IQANK1A0A1B0GTG1 560 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 TBC1D3BA6NDS4 549 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 WASH3PC4AMC7 463 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 TIMM44O43615 452 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 CTPS1P17812 591 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 ABL2P42684 1182 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 RPL26P61254 145 aaKnown RBP28.97■■■□□ 2.23
VEGFA-211ENST00000476772 PTPRCAPQ14761 206 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 PACS1Q6VY07 963 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 ZSWIM9Q86XI8 627 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 PPM1EQ8WY54 764 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 SUV39H2Q9H5I1 410 aa28.97■■■□□ 2.23
VEGFA-211ENST00000476772 RPL26L1Q9UNX3 145 aaKnown RBP28.97■■■□□ 2.23
VEGFA-211ENST00000476772 CRTAMO95727 393 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 CREB1P16220 341 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 TAF1AQ15573 450 aaPredicted RBP28.96■■■□□ 2.23
VEGFA-211ENST00000476772 TAOK1Q7L7X3 1001 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 DNAJC1Q96KC8 554 aaKnown RBP28.96■■■□□ 2.23
VEGFA-211ENST00000476772 GGT7Q9UJ14 662 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 A0A1W2PPM1 405 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 CCL22O00626 93 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 KAT7O95251 611 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 UGT2B4P06133 528 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 F7P08709 466 aaPredicted RBP28.96■■■□□ 2.23
VEGFA-211ENST00000476772 ALPIP09923 528 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 ARSDP51689 593 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 PPP2R2AP63151 447 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 GRM3Q14832 879 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 FNDC3BQ53EP0 1204 aaKnown RBP28.96■■■□□ 2.23
VEGFA-211ENST00000476772 OR13C4Q8NGS5 318 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 GRIN3AQ8TCU5 1115 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 CSGALNACT1Q8TDX6 532 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 PTPRN2Q92932 1015 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 ECHDC3Q96DC8 303 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 HEPHQ9BQS7 1158 aa28.96■■■□□ 2.23
VEGFA-211ENST00000476772 SLC4A1P02730 911 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 ZNF140P52738 457 aaPredicted RBP28.95■■■□□ 2.22
VEGFA-211ENST00000476772 TMPRSS15P98073 1019 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 ACVR1Q04771 509 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 KDM7AQ6ZMT4 941 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 STYXQ8WUJ0 223 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 PEX13Q92968 403 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 ZNF641Q96N77 438 aaPredicted RBP28.95■■■□□ 2.22
VEGFA-211ENST00000476772 CPNE1Q99829 537 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 RIMKLBQ9ULI2 386 aa28.95■■■□□ 2.22
VEGFA-211ENST00000476772 SERPINB9P50453 376 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 ATP1A2P50993 1020 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 PPARDQ03181 441 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 BMPR2Q13873 1038 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 ZNF234Q14588 700 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 KDM1BQ8NB78 822 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 HDAC10Q969S8 669 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 TRABDQ9H4I3 376 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 HACD3Q9P035 362 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 TXNDC16Q9P2K2 825 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 WASF2Q9Y6W5 498 aa28.94■■■□□ 2.22
VEGFA-211ENST00000476772 A0A0J9YYE9 177 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 A0A0U1RQS6 177 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 TRIM49D1C9J1S8 452 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 KRT37O76014 449 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 KRT38O76015 456 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 TRBC1P01850 177 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 SNRPAP09012 282 aaKnown RBP28.93■■■□□ 2.22
VEGFA-211ENST00000476772 GP5P40197 560 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 GRIA2P42262 883 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 THOC5Q13769 683 aaKnown RBP28.93■■■□□ 2.22
VEGFA-211ENST00000476772 LGSNQ5TDP6 509 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 GDPD4Q6W3E5 623 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 STRA8Q7Z7C7 330 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 CNTN4Q8IWV2 1026 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 UCMAQ8WVF2 138 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 MAGEE1Q9HCI5 957 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 FBRSL1Q9HCM7 1045 aaKnown RBP28.93■■■□□ 2.22
VEGFA-211ENST00000476772 ZNF711Q9Y462 761 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 ACTL7BQ9Y614 415 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 HMX2A2RU54 273 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 ANTXRLA6NF34 631 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 C2orf81A6NN90 581 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 APODP05090 189 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 HLA-EP13747 358 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 FOSL2P15408 326 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 PRAMEP78395 509 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 PREPLQ4J6C6 727 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-211ENST00000476772 TTC30BQ8N4P2 665 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 TBATAQ96M53 351 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 SELENOSQ9BQE4 189 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 NLE1Q9NVX2 485 aaPredicted RBP28.93■■■□□ 2.22
VEGFA-211ENST00000476772 LIMD1Q9UGP4 676 aa28.93■■■□□ 2.22
VEGFA-211ENST00000476772 SLC7A4O43246 635 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 LEFTY1O75610 366 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 RPP40O75818 363 aaKnown RBP28.92■■■□□ 2.22
VEGFA-211ENST00000476772 CTSLP07711 333 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 DENND6AQ8IWF6 608 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 OR4K2Q8NGD2 314 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 OR6P1Q8NGX9 317 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 KLHL32Q96NJ5 620 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 GUCD1Q96NT3 240 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 FAM167BQ9BTA0 163 aa28.92■■■□□ 2.22
VEGFA-211ENST00000476772 POLR3BQ9NW08 1133 aaPredicted RBP28.92■■■□□ 2.22
VEGFA-211ENST00000476772 SENP1Q9P0U3 644 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms