RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ESRRAP11474 423 aaPredicted RBP21.84■■□□□ 1.09
CCM2-206ENST00000474617 SAT1P21673 171 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 SLC8A1P32418 973 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 SUOXP51687 545 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 SGSHP51688 502 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 ZNF140P52738 457 aaPredicted RBP21.84■■□□□ 1.09
CCM2-206ENST00000474617 KCNJ2P63252 427 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 ARF5P84085 180 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 CFAP157Q5JU67 520 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 PSRC1Q6PGN9 363 aaPredicted RBP21.84■■□□□ 1.09
CCM2-206ENST00000474617 CNSTQ6PJW8 725 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 TMC8Q8IU68 726 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 CEP97Q8IW35 865 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 CARNMT1Q8N4J0 409 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 LEMD2Q8NC56 503 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 ACVR1CQ8NER5 493 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 PHOSPHO2Q8TCD6 241 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 SP7Q8TDD2 431 aaPredicted RBP21.84■■□□□ 1.09
CCM2-206ENST00000474617 SLC7A6OSQ96CW6 309 aaPredicted RBP21.84■■□□□ 1.09
CCM2-206ENST00000474617 RMDN1Q96DB5 314 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 UBXN10Q96LJ8 280 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 LRRC3Q9BY71 257 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 CDH19Q9H159 772 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 ASAH2Q9NR71 780 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 SMPD4Q9NXE4 827 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 PRKAG2Q9UGJ0 569 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 RAI2Q9Y5P3 530 aa21.84■■□□□ 1.09
CCM2-206ENST00000474617 OBSL1O75147 1896 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 F8W8V4 182 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 HGSO14964 777 aaPredicted RBP21.83■■□□□ 1.09
CCM2-206ENST00000474617 ITM2AO43736 263 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 TSPAN3O60637 253 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 CKMP06732 381 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 C8AP07357 584 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 AOC1P19801 751 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 CD9P21926 228 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 LPOP22079 712 aaPredicted RBP21.83■■□□□ 1.09
CCM2-206ENST00000474617 ABCG1P45844 678 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 NAA20P61599 178 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 UBE3AQ05086 875 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 FSCBQ5H9T9 825 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 AARS2Q5JTZ9 985 aaKnown RBP21.83■■□□□ 1.09
CCM2-206ENST00000474617 NCEH1Q6PIU2 408 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 TMC7Q7Z402 723 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 GLT6D1Q7Z4J2 308 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 PTAR1Q7Z6K3 402 aaPredicted RBP21.83■■□□□ 1.09
CCM2-206ENST00000474617 MFN1Q8IWA4 741 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 KREMEN2Q8NCW0 462 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 ADAMTS19Q8TE59 1207 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 AUTS2Q8WXX7 1259 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 BTBD10Q9BSF8 475 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 ZBED2Q9BTP6 218 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 GATA5Q9BWX5 397 aaPredicted RBP21.83■■□□□ 1.09
CCM2-206ENST00000474617 NMUR2Q9GZQ4 415 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 GPAMQ9HCL2 828 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.83■■□□□ 1.09
CCM2-206ENST00000474617 TRIM33Q9UPN9 1127 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 COMMD10Q9Y6G5 202 aa21.83■■□□□ 1.09
CCM2-206ENST00000474617 BRCA2P51587 3418 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 CAPN14A8MX76 684 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 GLUD1P00367 558 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 GOT2P00505 430 aaKnown RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 LINC00271P0C7V0 271 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 KITP10721 976 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 GRIA4P48058 902 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 STC1P52823 247 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 GALNT1Q10472 559 aaPredicted RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 GALNT3Q14435 633 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 TXNDC8Q6A555 127 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 MFSD6LQ8IWD5 586 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 SUGP1Q8IWZ8 645 aaKnown RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 AFAP1L2Q8N4X5 818 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 CFAP61Q8NHU2 1237 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 CDKN2AIPNLQ96HQ2 116 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 FAR2Q96K12 515 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 DNAJC1Q96KC8 554 aaKnown RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 CNDP1Q96KN2 507 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 TBATAQ96M53 351 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 RAD9AQ99638 391 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 TRMOQ9BU70 441 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 KIAA1522Q9P206 1035 aaPredicted RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 XPR1Q9UBH6 696 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 MARCOQ9UEW3 520 aaPredicted RBP21.82■■□□□ 1.08
CCM2-206ENST00000474617 ARHGAP26Q9UNA1 814 aa21.82■■□□□ 1.08
CCM2-206ENST00000474617 E2F8A0AVK6 867 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 ZBBXA8MT70 800 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 ANKRD66B4E2M5 251 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 H7C0S8 307 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 SLC22A2O15244 555 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 WISP3O95389 354 aaPredicted RBP21.81■■□□□ 1.08
CCM2-206ENST00000474617 CYBBP04839 570 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 ACRP10323 421 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 PMLP29590 882 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 ARSDP51689 593 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 PLK1P53350 603 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 RHOAP61586 193 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 GAREM2Q75VX8 874 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 C16orf59Q7L2K0 433 aa21.81■■□□□ 1.08
CCM2-206ENST00000474617 OTOP2Q7RTS6 562 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms