RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ACAP2Q15057 778 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 TAF1AQ15573 450 aaPredicted RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 FAM83EQ2M2I3 478 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 PREPLQ4J6C6 727 aaPredicted RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 DNAL1Q4LDG9 190 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 INO80DQ53TQ3 878 aaPredicted RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 SPOUT1Q5T280 376 aaKnown RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 ZNF549Q6P9A3 640 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 PIWIL4Q7Z3Z4 852 aaKnown RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 TMC7Q7Z402 723 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 PTAR1Q7Z6K3 402 aaPredicted RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 ITIH5Q86UX2 942 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 TMC8Q8IU68 726 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 CPXM2Q8N436 756 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 TEX9Q8N6V9 391 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 GPATCH11Q8N954 259 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 TDRD5Q8NAT2 981 aaKnown RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 TXNDC5Q8NBS9 432 aaKnown RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 HJURPQ8NCD3 748 aaPredicted RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 OR13C4Q8NGS5 318 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 TTC8Q8TAM2 541 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 MAPK15Q8TD08 544 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 HEXDCQ8WVB3 486 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 CCDC126Q96EE4 140 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 DNAJC1Q96KC8 554 aaKnown RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 SCYL1Q96KG9 808 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 RILPQ96NA2 401 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 NDNQ99608 321 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 CCDC28BQ9BUN5 200 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 ILKAPQ9H0C8 392 aaPredicted RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 ZNF385DQ9H6B1 395 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 COG4Q9H9E3 785 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 INTS10Q9NVR2 710 aaKnown RBP9.85□□□□□ -0.83
USP39-214ENST00000474572 LHX3Q9UBR4 397 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 VTI1BQ9UEU0 232 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 VWA7Q9Y334 891 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 KCTD3Q9Y597 815 aa9.85□□□□□ -0.83
USP39-214ENST00000474572 CXorf51AA0A1B0GTR3 108 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CCDC162PA2VCL2 907 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 OR51F1A6NGY5 319 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 H7C0S8 307 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 SLC22A2O15244 555 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CD3EAPO15446 510 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 TEX28O15482 410 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 LUC7L3O95232 432 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 PIGNO95427 931 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CRTAMO95727 393 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 GLP2RO95838 553 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ENO1P06733 434 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 CTSAP10619 480 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 IRF1P10914 325 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 MBL2P11226 248 aaPredicted RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 PFKLP17858 780 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 GM2AP17900 193 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 SAT1P21673 171 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CD9P21926 228 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ITGB8P26012 769 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ADSLP30566 484 aaPredicted RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 ELF1P32519 619 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CPOXP36551 454 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 GJA8P48165 433 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 GLRBP48167 497 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 RPL14P50914 215 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 MNAT1P51948 309 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CCNG1P51959 295 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 STC1P52823 247 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 NAGLUP54802 743 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CDKN2DP55273 166 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 SLC7A9P82251 487 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ZXDBP98169 803 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 NFKB2Q00653 900 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 TIAL1Q01085 375 aaKnown RBP eCLIP9.84□□□□□ -0.83
USP39-214ENST00000474572 USP4Q13107 963 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 UBAP2LQ14157 1087 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 SEMA3AQ14563 771 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 LRRC26Q2I0M4 334 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 PABPC1LQ4VXU2 614 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 SLC9B1Q4ZJI4 515 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ARL13AQ5H913 290 aaPredicted RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 AGAP9Q5VTM2 703 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 RNF219Q5W0B1 726 aaPredicted RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 ICE2Q659A1 982 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 MRNIPQ6NTE8 343 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 LILRA6Q6PI73 481 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 NCEH1Q6PIU2 408 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 AFTPHQ6ULP2 937 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 TMEM207Q6UWW9 146 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ARHGAP24Q8N264 748 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 TTC30BQ8N4P2 665 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 DCAF4L2Q8NA75 395 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 KDM1BQ8NB78 822 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 RBM15BQ8NDT2 890 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 OR4L1Q8NH43 312 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 BLOC1S5Q8TDH9 187 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 ARMC5Q96C12 935 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 CDKN2AIPNLQ96HQ2 116 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 MAELQ96JY0 434 aaKnown RBP9.84□□□□□ -0.83
USP39-214ENST00000474572 CNDP1Q96KN2 507 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 C19orf43Q9BQ61 176 aa9.84□□□□□ -0.83
USP39-214ENST00000474572 AARSD1Q9BTE6 412 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms