RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 E9PAM4 449 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 AP3B1O00203 1094 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 TRIM38O00635 465 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF189O75820 626 aaPredicted RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 WISP3O95389 354 aaPredicted RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 CLPTM1O96005 669 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 MMP2P08253 660 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 ALDOCP09972 364 aaKnown RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 OR4Q2P0C623 313 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 HAPLN1P10915 354 aaPredicted RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 NELFEP18615 380 aaKnown RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 PCSK1P29120 753 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 PSMD8P48556 350 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF135P52742 658 aaPredicted RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 COG7P83436 770 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 APOFQ13790 326 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 TRIM25Q14258 630 aaKnown RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 AGKQ53H12 422 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 PIK3R6Q5UE93 754 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 HMBOX1Q6NT76 420 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 LAYNQ6UX15 382 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 TFAP2DQ7Z6R9 452 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 TMEM126BQ8IUX1 230 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 SLC29A1Q99808 456 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 EPB41L1Q9H4G0 881 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 MRM3Q9HC36 420 aaKnown RBP11□□□□□ -0.65
C9orf3-214ENST00000473778 GIMAP2Q9UG22 337 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 RNF11Q9Y3C5 154 aa11□□□□□ -0.65
C9orf3-214ENST00000473778 A0A087X1B8 175 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 TRPC5OSA6NMA1 111 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 TNFRSF10BO14763 440 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PSMD3O43242 534 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 C8BP07358 591 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 DNAJB1P25685 340 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PCSK6P29122 969 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 RPL5P46777 297 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 GEMP55040 296 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 MRPS6P82932 125 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 TIAL1Q01085 375 aaKnown RBP eCLIP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SLC10A7Q0GE19 358 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 FASTKQ14296 549 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PTPRCAPQ14761 206 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 GPR158Q5T848 1215 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SDHAF4Q5VUM1 108 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 KLHDC10Q6PID8 442 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 RETREG3Q86VR2 466 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CILP2Q8IUL8 1156 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 FUNDC1Q8IVP5 155 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CCDC117Q8IWD4 279 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SP7Q8TDD2 431 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 LPGAT1Q92604 370 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 DLG3Q92796 817 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PTERQ96BW5 349 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF512Q96ME7 567 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ACBD6Q9BR61 282 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 MRPL1Q9BYD6 325 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 COQ10BQ9H8M1 238 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 RMI1Q9H9A7 625 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ATP13A1Q9HD20 1204 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 POLR3BQ9NW08 1133 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CD300AQ9UGN4 299 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 IPO11Q9UI26 975 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 GMEB1Q9Y692 573 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ANKRD12Q6UB98 2062 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 A0A1B0GTL3 188 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SMIM31A0A1B0GVY4 71 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 LRRC14BA6NHZ5 514 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 C9JVG2 144 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PSMD12O00232 456 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 UBDO15205 165 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 B4GALT3O60512 393 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 LEPRP48357 1165 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 POLD2P49005 469 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CPT1AP50416 773 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CDH13P55290 713 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 DSC2Q02487 901 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CREB5Q02930 508 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 FSCN1Q16658 493 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 USP41Q3LFD5 358 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 MTX3Q5HYI7 312 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 C8orf82Q6P1X6 216 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 AMIGO2Q86SJ2 522 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ISCA2Q86U28 154 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 CHERPQ8IWX8 916 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 AHI1Q8N157 1196 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 RTL3Q8N8U3 475 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PIP4K2CQ8TBX8 421 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SMOC2Q9H3U7 446 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ALG9Q9H6U8 611 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF696Q9H7X3 374 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 UTP6Q9NYH9 597 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SUCOQ9UBS9 1254 aaKnown RBP10.99□□□□□ -0.65
C9orf3-214ENST00000473778 SARDHQ9UL12 918 aa10.99□□□□□ -0.65
C9orf3-214ENST00000473778 LAMA2P24043 3122 aaKnown RBP10.98□□□□□ -0.65
C9orf3-214ENST00000473778 PLOD2O00469 737 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 CNTN5O94779 1100 aa10.98□□□□□ -0.65
C9orf3-214ENST00000473778 LTA4HP09960 611 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms