RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TRIM38O00635 465 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 SLC22A2O15244 555 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 GLRA3O75311 464 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 ACADSBP45954 432 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 NUMBP49757 651 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 PSEN2P49810 448 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 CBLBQ13191 982 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 MTX3Q5HYI7 312 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 PERM1Q5SV97 790 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 N4BP2L1Q5TBK1 243 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 CMC1Q7Z7K0 106 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 HEATR4Q86WZ0 1026 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 ANKRD13BQ86YJ7 626 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 MED30Q96HR3 178 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 FCRL3Q96P31 734 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 CRTAC1Q9NQ79 661 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 CNGB3Q9NQW8 809 aa18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 TRIP12Q14669 1992 aaPredicted RBP18.15■□□□□ 0.5
SNAPC3-205ENST00000467062 PLXNA1Q9UIW2 1896 aa18.14■□□□□ 0.5
SNAPC3-205ENST00000467062 TTC34A8MYJ7 566 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 EEF2KO00418 725 aaKnown RBP18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 MSI1O43347 362 aaKnown RBP18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 JRKO75564 520 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 NCAM1P13591 858 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 GLDCP23378 1020 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 NME5P56597 212 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 RFTN1Q14699 578 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 SV2CQ496J9 727 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 KCTD8Q6ZWB6 473 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 ZSCAN18Q8TBC5 510 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 RCN3Q96D15 328 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 GAD1Q99259 594 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 FAM124BQ9H5Z6 455 aaPredicted RBP18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 EFCAB1Q9HAE3 211 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 XPNPEP3Q9NQH7 507 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 LAMA3Q16787 3333 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 CLOCKO15516 846 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 TPH1P17752 444 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 CNTFP26441 200 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 RPL34P49207 117 aaKnown RBP18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 SPCS2Q15005 226 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 TTC30BQ8N4P2 665 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 C3orf58Q8NDZ4 430 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 ACMSDQ8TDX5 336 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 TOP1MTQ969P6 601 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 ASB9Q96DX5 294 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 NPY6RQ99463 290 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 MIOSQ9NXC5 875 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 PSME2Q9UL46 239 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 EMCNQ9ULC0 261 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 ST14Q9Y5Y6 855 aa18.14■□□□□ 0.49
SNAPC3-205ENST00000467062 ILVBLA1L0T0 632 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 PLIN3O60664 434 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 ERCC2P18074 760 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 EEF1DP29692 281 aaKnown RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 NOS2P35228 1153 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 CLCNKBP51801 687 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 RHDQ02161 417 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 PCLAFQ15004 111 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 WDR45BQ5MNZ6 344 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 TNS4Q8IZW8 715 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 NPWQ8N729 165 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 PACRGLQ8N7B6 248 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 ZNF486Q96H40 463 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 AGAP2Q99490 1192 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 TCF7L2Q9NQB0 619 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 KLHL8Q9P2G9 620 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 CRNNQ9UBG3 495 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 CASTOR2A6NHX0 329 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 M0QX08 132 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 KCNE1P15382 129 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 TGM1P22735 817 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 NR4A1P22736 598 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 IDUAP35475 653 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 KRT6CP48668 564 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 SIGIRRQ6IA17 410 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 KIAA2013Q8IYS2 634 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 SIX5Q8N196 739 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 GTF3C2Q8WUA4 911 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 RAB2BQ8WUD1 216 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 SH3YL1Q96HL8 342 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 PCED1BQ96HM7 432 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 SENP8Q96LD8 212 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 UHRF1Q96T88 793 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 HOXD1Q9GZZ0 328 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 RAD21L1Q9H4I0 556 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 MARCH7Q9H992 704 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 GPN2Q9H9Y4 310 aaPredicted RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 N6AMT1Q9Y5N5 214 aa18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 LAMA2P24043 3122 aaKnown RBP18.13■□□□□ 0.49
SNAPC3-205ENST00000467062 GLTPD2A6NH11 291 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 RALBP11234 206 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 OPRL1P41146 370 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 IFRD2Q12894 506 aaPredicted RBP18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 DLG2Q15700 870 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 SLC9B1Q4ZJI4 515 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 HERC6Q8IVU3 1022 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 C10orf107Q8IVU9 208 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 ANKFN1Q8N957 763 aa18.12■□□□□ 0.49
SNAPC3-205ENST00000467062 MFSD2AQ8NA29 543 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms