RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 CACTIN-AS1Q8N1I8 211 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 NSMCE1Q8WV22 266 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 ASB12Q8WXK4 309 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 TSACCQ96A04 125 aaPredicted RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 CINPQ9BW66 212 aaPredicted RBP13.03□□□□□ -0.32
TREX1-203ENST00000456089 PACSIN1Q9BY11 444 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SYNDIG1Q9H7V2 258 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 PDFQ9HBH1 243 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 PCDH12Q9NPG4 1184 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SIRPGQ9P1W8 387 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SPASTQ9UBP0 616 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 CSNK1G3Q9Y6M4 447 aa13.03□□□□□ -0.32
TREX1-203ENST00000456089 SCN8AQ9UQD0 1980 aa13.02□□□□□ -0.32
TREX1-203ENST00000456089 ARHGEF17Q96PE2 2063 aaPredicted RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 TTC24A2A3L6 582 aaPredicted RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 PROSCO94903 275 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 GP1BAP07359 652 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 C6P13671 934 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 TCF4P15884 667 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 TSHRP16473 764 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 AMPD1P23109 780 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 CXADRP78310 365 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 SLC25A11Q02978 314 aaKnown RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 TLE3Q04726 772 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 DPYSQ14117 519 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 MESDQ14696 234 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 RFTN1Q14699 578 aaPredicted RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 NR0B2Q15466 257 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 ASTE1Q2TB18 679 aaPredicted RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 WSCD2Q2TBF2 565 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 TMEM52BQ4KMG9 183 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 FOXR1Q6PIV2 292 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 MACC1Q6ZN28 852 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 RD3Q7Z3Z2 195 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 HID1Q8IV36 788 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 BBS5Q8N3I7 341 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 TSEN2Q8NCE0 465 aaKnown RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 SLC35G2Q8TBE7 412 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 CSPG4P5Q96PW8 444 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 LGMNQ99538 433 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 SLC13A1Q9BZW2 595 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 SUV39H2Q9H5I1 410 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 PCDH18Q9HCL0 1135 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 LUC7LQ9NQ29 371 aaKnown RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 RCOR3Q9P2K3 495 aaPredicted RBP13.02□□□□□ -0.33
TREX1-203ENST00000456089 DKK3Q9UBP4 350 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 GULP1Q9UBP9 304 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 NENFQ9UMX5 172 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 SATB2Q9UPW6 733 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 OR1A2Q9Y585 309 aa13.02□□□□□ -0.33
TREX1-203ENST00000456089 UNC13CQ8NB66 2214 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 A8MX80 341 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 YY2O15391 372 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 PCCBP05166 539 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ANXA6P08133 673 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ARHGAP25P42331 645 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 LIG3P49916 1009 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 RENBPP51606 427 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 PPARDQ03181 441 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 IL10RBQ08334 325 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 TBX2Q13207 712 aaPredicted RBP13.01□□□□□ -0.33
TREX1-203ENST00000456089 PTK2BQ14289 1009 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 INPP5AQ14642 412 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 LRRC14Q15048 493 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 PDK2Q15119 407 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 SPA17Q15506 151 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ISXQ2M1V0 245 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 TXNRD3NBQ6F5E7 133 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ZSCAN30Q86W11 494 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ATPAF2Q8N5M1 289 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 NPWQ8N729 165 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 KYQ8NBH2 561 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 PLA2G15Q8NCC3 412 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 BTN2A2Q8WVV5 523 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 NSMCE3Q96MG7 304 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 BOCQ9BWV1 1114 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 CPEB1Q9BZB8 566 aaKnown RBP13.01□□□□□ -0.33
TREX1-203ENST00000456089 RBSNQ9H1K0 784 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 POLR1BQ9H9Y6 1135 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 USP29Q9HBJ7 922 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 CPNE5Q9HCH3 593 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 SALL4Q9UJQ4 1053 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ENTPD2Q9Y5L3 495 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 ATMQ13315 3056 aa13.01□□□□□ -0.33
TREX1-203ENST00000456089 EME2A4GXA9 379 aaPredicted RBP13□□□□□ -0.33
TREX1-203ENST00000456089 LMO7DNF2Z398 122 aa13□□□□□ -0.33
TREX1-203ENST00000456089 AGRPO00253 132 aa13□□□□□ -0.33
TREX1-203ENST00000456089 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
TREX1-203ENST00000456089 LZTS3O60299 673 aaPredicted RBP13□□□□□ -0.33
TREX1-203ENST00000456089 IPO7O95373 1038 aaKnown RBP13□□□□□ -0.33
TREX1-203ENST00000456089 MAN1A1P33908 653 aa13□□□□□ -0.33
TREX1-203ENST00000456089 CYLC1P35663 651 aaPredicted RBP13□□□□□ -0.33
TREX1-203ENST00000456089 MMP12P39900 470 aa13□□□□□ -0.33
TREX1-203ENST00000456089 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms