RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 CD48P09326 243 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 IL4RP24394 825 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 SCNN1BP51168 640 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 RENBPP51606 427 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 TBX2Q13207 712 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-216ENST00000449971 MESDQ14696 234 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 LBRQ14739 615 aaKnown RBP17.67■□□□□ 0.42
FAM3A-216ENST00000449971 ZFYVE27Q5T4F4 411 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 TMCO4Q5TGY1 634 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 SARM1Q6SZW1 724 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 PTAR1Q7Z6K3 402 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-216ENST00000449971 ABI3BPQ7Z7G0 1075 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 LSMEM2Q8N112 164 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 SLC35G2Q8TBE7 412 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 FAM174AQ8TBP5 190 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 MAPK15Q8TD08 544 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 ASB12Q8WXK4 309 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 ZNF599Q96NL3 588 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 LENG8Q96PV6 779 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-216ENST00000449971 WRAP53Q9BUR4 548 aaKnown RBP17.67■□□□□ 0.42
FAM3A-216ENST00000449971 TRIM4Q9C037 500 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 ATP13A3Q9H7F0 1226 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 POLR1BQ9H9Y6 1135 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 THSD1Q9NS62 852 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 KLHL11Q9NVR0 708 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 RCOR3Q9P2K3 495 aaPredicted RBP17.67■□□□□ 0.42
FAM3A-216ENST00000449971 SEPT3Q9UH03 358 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 LCMT1Q9UIC8 334 aa17.67■□□□□ 0.42
FAM3A-216ENST00000449971 SPTA1P02549 2419 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 POM121BA6NF01 834 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 NEBLO76041 1014 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 TM7SF2O76062 418 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 ALPPL2P10696 532 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 SERPINA4P29622 427 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 SERPINB6P35237 376 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 LSSP48449 732 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 SUOXP51687 545 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 TAS2R40P59535 323 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 BCL2L1Q07817 233 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 NSUN2Q08J23 767 aaKnown RBP eCLIP17.66■□□□□ 0.42
FAM3A-216ENST00000449971 SLC10A7Q0GE19 358 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 ELP6Q0PNE2 266 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 UGP2Q16851 508 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 CDCP2Q5VXM1 449 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 DCP2Q8IU60 420 aaKnown RBP17.66■□□□□ 0.42
FAM3A-216ENST00000449971 ATPAF2Q8N5M1 289 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 NSMCE1Q8WV22 266 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 TTC9Q92623 222 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 WBP1Q96G27 269 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 APOLD1Q96LR9 279 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 KLF6Q99612 283 aaPredicted RBP17.66■□□□□ 0.42
FAM3A-216ENST00000449971 SATB2Q9UPW6 733 aa17.66■□□□□ 0.42
FAM3A-216ENST00000449971 MUSKO15146 869 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 MAFKO60675 156 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 PIAS2O75928 621 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 KRT7P08729 469 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 CKMT1AP12532 417 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 RBMS1P29558 406 aaKnown RBP17.65■□□□□ 0.42
FAM3A-216ENST00000449971 ARSEP51690 589 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 ERVPABLB-1P60509 514 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 DPYSL3Q14195 570 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 ZNF235Q14590 738 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 PDK2Q15119 407 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 TMEM52BQ4KMG9 183 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 ERAP2Q6P179 960 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 BRAT1Q6PJG6 821 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 CRTC1Q6UUV9 634 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 KYAT3Q6YP21 454 aaKnown RBP17.65■□□□□ 0.42
FAM3A-216ENST00000449971 MAP7D3Q8IWC1 876 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 FAM71BQ8TC56 605 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 IFI44Q8TCB0 444 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 PSKH2Q96QS6 385 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 PCDH12Q9NPG4 1184 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 ASCL3Q9NQ33 180 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 DNAJC28Q9NX36 388 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 COL12A1Q99715 3063 aa17.65■□□□□ 0.42
FAM3A-216ENST00000449971 TSPAN11A1L157 253 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 TTC24A2A3L6 582 aaPredicted RBP17.64■□□□□ 0.41
FAM3A-216ENST00000449971 CPED1A4D0V7 1026 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 WISP1O95388 367 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 PRKCGP05129 697 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 MAN1A1P33908 653 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 RABIFP47224 123 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 AP1S1P61966 158 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 ANKRD20A8PQ5CZ79 823 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 ZSWIM9Q86XI8 627 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 SLC22A18ASQ8N1D0 253 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 BBS5Q8N3I7 341 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 PCDH19Q8TAB3 1148 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 CENPTQ96BT3 561 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 C1QTNF7Q9BXJ2 289 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 RBSNQ9H1K0 784 aa17.64■□□□□ 0.41
FAM3A-216ENST00000449971 RIOK3O14730 519 aaKnown RBP17.63■□□□□ 0.41
FAM3A-216ENST00000449971 DXOO77932 396 aaKnown RBP17.63■□□□□ 0.41
FAM3A-216ENST00000449971 PEX11BO96011 259 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 HSPA9P38646 679 aaKnown RBP17.63■□□□□ 0.41
FAM3A-216ENST00000449971 NFATC3Q12968 1075 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 PDE1CQ14123 709 aaPredicted RBP17.63■□□□□ 0.41
FAM3A-216ENST00000449971 CDKN3Q16667 212 aa17.63■□□□□ 0.41
FAM3A-216ENST00000449971 MARC1Q5VT66 337 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms