RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NUDCD1Q96RS6 583 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 APOOQ9BUR5 198 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 TRIM5Q9C035 493 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 B4GALT6Q9UBX8 382 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 APOBEC3BQ9UH17 382 aaKnown RBP10.93□□□□□ -0.66
SF3A1-203ENST00000444440 PCDHB1Q9Y5F3 818 aa10.93□□□□□ -0.66
SF3A1-203ENST00000444440 ZNF106Q9H2Y7 1883 aaKnown RBP10.93□□□□□ -0.66
SF3A1-203ENST00000444440 FAM208BQ5VWN6 2430 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 SSU72P8A0A1W2PR75 194 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 TLX3O43711 291 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 RECQL5O94762 991 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 PDHA1P08559 390 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 H2AFZP0C0S5 128 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 TMEM253P0C7T8 217 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 JUPP14923 745 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 TSHRP16473 764 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 LHCGRP22888 699 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 SSR1P43307 286 aaKnown RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 SUOXP51687 545 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 THOP1P52888 689 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 YPEL5P62699 121 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 DAB2P98082 770 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 GBE1Q04446 702 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 GALNT2Q10471 571 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 TBX2Q13207 712 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 ZNF235Q14590 738 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 NFATC4Q14934 902 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 PAFAH1B3Q15102 231 aaKnown RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 CNGA3Q16281 694 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 CDKN3Q16667 212 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 ANKRD20A8PQ5CZ79 823 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 PERM1Q5SV97 790 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 CFAP58Q5T655 872 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 ERAP2Q6P179 960 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 RFLNAQ6ZTI6 216 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 H2AFVQ71UI9 128 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 TSPAN33Q86UF1 283 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 SFTPA2Q8IWL1 248 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 TEX26Q8N6G2 289 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 CTNNBL1Q8WYA6 563 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 RAPGEF5Q92565 580 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 FAF2Q96CS3 445 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 CRELD1Q96HD1 420 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 ANP32EQ9BTT0 268 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 LGR4Q9BXB1 951 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 NHEJ1Q9H9Q4 299 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 NT5MQ9NPB1 228 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 MRPL40Q9NQ50 206 aaKnown RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 RCOR3Q9P2K3 495 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-203ENST00000444440 UVRAGQ9P2Y5 699 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 DKK4Q9UBT3 224 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 GPSM3Q9Y4H4 160 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 HYOU1Q9Y4L1 999 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 CSNK1G3Q9Y6M4 447 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 ZFYVE26Q68DK2 2539 aa10.92□□□□□ -0.66
SF3A1-203ENST00000444440 A0A1W2PNU3 283 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 TMEM202A6NGA9 273 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 NPIPB15A6NHN6 443 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 C3orf70A6NLC5 250 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 H3BM21 787 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 LZTS3O60299 673 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 OPA1O60313 960 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 CPP00450 1065 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ELFN1P0C7U0 828 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 TGM2P21980 687 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 SERPINB6P35237 376 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 GARSP41250 739 aaKnown RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 MMP13P45452 471 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 DSC2Q02487 901 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ILKQ13418 452 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 MESDQ14696 234 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 HADHQ16836 314 aaKnown RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 FAXCQ5TGI0 409 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 CDCP2Q5VXM1 449 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ZCCHC8Q6NZY4 707 aaKnown RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 C19orf48Q6RUI8 117 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 SARM1Q6SZW1 724 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 CRTC1Q6UUV9 634 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ENPP7Q6UWV6 458 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 HID1Q8IV36 788 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 SLC35F3Q8IY50 421 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 CBARPQ8N350 705 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 PDCD7Q8N8D1 485 aaKnown RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 DCBLD1Q8N8Z6 715 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 SLC35G2Q8TBE7 412 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 IFI44Q8TCB0 444 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 PDCD6IPQ8WUM4 868 aaKnown RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
SF3A1-203ENST00000444440 PIH1D2Q8WWB5 315 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 OR1E3Q8WZA6 343 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 MAML1Q92585 1016 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 COQ10AQ96MF6 247 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 ZNF670Q9BS34 389 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 BOCQ9BWV1 1114 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 C1QTNF7Q9BXJ2 289 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 DEF6Q9H4E7 631 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 FGF22Q9HCT0 170 aa10.91□□□□□ -0.66
SF3A1-203ENST00000444440 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms