RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PDIA2Q13087 525 aaKnown RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 HIF1AQ16665 826 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 CDKN3Q16667 212 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 BBS9Q3SYG4 887 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 FAM153CQ494X1 144 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 DNAJC21Q5F1R6 531 aaKnown RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 PCID2Q5JVF3 399 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 PIP5KL1Q5T9C9 394 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 FBXL19Q6PCT2 694 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 CENPUQ71F23 418 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 CACUL1Q86Y37 369 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 GSPT2Q8IYD1 628 aaKnown RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 MPP5Q8N3R9 675 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 HDDC3Q8N4P3 179 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 MDGA1Q8NFP4 955 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 TSTD1Q8NFU3 115 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 BRSK1Q8TDC3 778 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 HMGB4Q8WW32 186 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 FAM131CQ96AQ9 280 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 MCCC1Q96RQ3 725 aaPredicted RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 LYSMD1Q96S90 227 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 SRPK1Q96SB4 655 aaKnown RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 FMO2Q99518 471 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 PHACTR1Q9C0D0 580 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 ITM2CQ9NQX7 267 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 SYBUQ9NX95 663 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 SPO11Q9Y5K1 396 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 TECTAO75443 2155 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 A0A1W2PP55 124 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 CAPN8A6NHC0 703 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 ALDH1A2O94788 518 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
TMEM53-206ENST00000420706 ADRA1DP25100 572 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 NFKBIAP25963 317 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 P2RY2P41231 377 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 ELK3P41970 407 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 CXCL12P48061 93 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 FAM193AP78312 1265 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 SEMG2Q02383 582 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
TMEM53-206ENST00000420706 POU6F1Q14863 301 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 LRRC73Q5JTD7 316 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 DENND2CQ68D51 928 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 CRTC1Q6UUV9 634 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 KIAA1324Q6UXG2 1013 aaKnown RBP12.53□□□□□ -0.4
TMEM53-206ENST00000420706 USP30Q70CQ3 517 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 PGBD3Q8N328 593 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 CAMKK1Q8N5S9 505 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 BLOC1S5Q8TDH9 187 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 RAB7BQ96AH8 199 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 HHIPQ96QV1 700 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 RANBP9Q96S59 729 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 OMDQ99983 421 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 IL22Q9GZX6 179 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 SAYSD1Q9NPB0 183 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 PCDH12Q9NPG4 1184 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 HACD3Q9P035 362 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 B4GALT6Q9UBX8 382 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 SERGEFQ9UGK8 458 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 EBF1Q9UH73 591 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 TEX264Q9Y6I9 313 aa12.53□□□□□ -0.4
TMEM53-206ENST00000420706 A0A0U1RQS6 177 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 MAGEB16A2A368 324 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 NPIPB15A6NHN6 443 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 A8MX80 341 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 AURKAO14965 403 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 AREL1O15033 823 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 SPINT1O43278 529 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 LDB2O43679 373 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 PAPSS2O95340 614 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CLDN7O95471 211 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 ACADMP11310 421 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 VIPR1P32241 457 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 MAGEA4P43358 317 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CCR3P51677 355 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CRADDP78560 199 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 ELP6Q0PNE2 266 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 RALGDSQ12967 914 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TAF1AQ15573 450 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TTC31Q49AM3 519 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
TMEM53-206ENST00000420706 AGBL4Q5VU57 503 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 ANO7Q6IWH7 933 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 ERAP2Q6P179 960 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 CEP128Q6ZU80 1094 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 USP45Q70EL2 814 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TMC3Q7Z5M5 1100 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 BMP8AQ7Z5Y6 402 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 TSPAN33Q86UF1 283 aa12.52□□□□□ -0.41
TMEM53-206ENST00000420706 KBTBD6Q86V97 674 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms