RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ZNF384Q8TF68 577 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 C8orf48Q96LL4 319 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 WHRNQ9P202 907 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 TGM5O43548 720 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 WDR47O94967 919 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 KCNE1P15382 129 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 RAD23BP54727 409 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 RPS7P62081 194 aaKnown RBP17■□□□□ 0.31
SYNGAP1-202ENST00000418600 SYT12Q8IV01 421 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 C2orf73Q8N5S3 287 aaPredicted RBP17■□□□□ 0.31
SYNGAP1-202ENST00000418600 TC2NQ8N9U0 490 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 BRSK1Q8TDC3 778 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 LDHAL6BQ9BYZ2 381 aaPredicted RBP17■□□□□ 0.31
SYNGAP1-202ENST00000418600 DPY30Q9C005 99 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 RBM12Q9NTZ6 932 aaKnown RBP17■□□□□ 0.31
SYNGAP1-202ENST00000418600 FTSJ1Q9UET6 329 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 PRR23D1E9PI22 279 aaPredicted RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 INSIG1O15503 277 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 PRR23D2P0DMB1 279 aaPredicted RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 NDUFS1P28331 727 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RALGDSQ12967 914 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ACAP2Q15057 778 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 CERCAMQ5T4B2 595 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 NEPROQ6NW34 567 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 MIER2Q8N344 545 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 IL22RA1Q8N6P7 574 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 PHF21BQ96EK2 531 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ATP6V1G3Q96LB4 118 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 IGSF9Q9P2J2 1179 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 PRKAG3Q9UGI9 489 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 EIF3HO15372 352 aaKnown RBP eCLIP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 MLYCDO95822 493 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 AGTP01019 485 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ADRA1BP35368 520 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 CXCR3P49682 368 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ACSM2AQ08AH3 577 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 FUT11Q495W5 492 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ATXN7L2Q5T6C5 722 aaPredicted RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ACSM2BQ68CK6 577 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 IL1RAPL1Q9NZN1 696 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 COPS7AQ9UBW8 275 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RGPD5Q99666 1765 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 CST3P01034 146 aaPredicted RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 HIST1H2ABP04908 130 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 DAOAP59103 153 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RUNX1T1Q06455 604 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RUNX3Q13761 415 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 FBXO43Q4G163 708 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 CAPN13Q6MZZ7 669 aaPredicted RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 HIST3H2AQ7L7L0 130 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 HIST1H2ACQ93077 130 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RAD21L1Q9H4I0 556 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 DNAJC11Q9NVH1 559 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 FLT3P36888 993 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 TAF13Q15543 124 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 LY6G5CQ5SRR4 150 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 IFNEQ86WN2 208 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 ADCY4Q8NFM4 1077 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 SERPINB12Q96P63 405 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RNF157Q96PX1 679 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 EBNA1BP2Q99848 306 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 AIF1LQ9BQI0 150 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 HGH1Q9BTY7 390 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 SNED1Q8TER0 1413 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 RFPL2O75678 378 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 SKIV2L2P42285 1042 aaKnown RBP16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 DENND1AQ8TEH3 1009 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 FANCFQ9NPI8 374 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 XPNPEP1Q9NQW7 623 aa16.99■□□□□ 0.31
SYNGAP1-202ENST00000418600 SNTNA6NMZ2 147 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 S100A5P33763 92 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 CACNG1Q06432 222 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 CAPRIN2Q6IMN6 1127 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 MSANTD2Q6P1R3 559 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 XYLT1Q86Y38 959 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 RHBDD1Q8TEB9 315 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 C12orf66Q96MD2 445 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 DUSP9Q99956 384 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 OSBPL10Q9BXB5 764 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 TPSD1Q9BZJ3 242 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 H0Y3Z8 333 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 KLHL2O95198 593 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 NOMO3P69849 1222 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 BMPR2Q13873 1038 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 DEPDC1Q5TB30 811 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 LUZP2Q86TE4 346 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 CENPLQ8N0S6 344 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 ACAT2Q9BWD1 397 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 TMCC3Q9ULS5 477 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 IGFALSP35858 605 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 NAB1Q13506 487 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 MAPK15Q8TD08 544 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 FBXO6Q9NRD1 293 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 SCML2Q9UQR0 700 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 CD3EAPO15446 510 aaKnown RBP16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 SHHQ15465 462 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 SOWAHAQ2M3V2 549 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 UBE2R2Q712K3 238 aaPredicted RBP16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 FAM84AQ96KN4 292 aa16.98■□□□□ 0.31
SYNGAP1-202ENST00000418600 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms