RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 VOPP1Q96AW1 172 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 ERLEC1Q96DZ1 483 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 MCCC1Q96RQ3 725 aaPredicted RBP6.43□□□□□ -1.38
USP54-202ENST00000413442 TSGA10Q9BZW7 698 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 SPTLC3Q9NUV7 552 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 RBM22Q9NW64 420 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP54-202ENST00000413442 DTLQ9NZJ0 730 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 FTSJ1Q9UET6 329 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 FNDC3AQ9Y2H6 1198 aaKnown RBP6.43□□□□□ -1.38
USP54-202ENST00000413442 DGKBQ9Y6T7 804 aa6.43□□□□□ -1.38
USP54-202ENST00000413442 DMXL1Q9Y485 3027 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 MED19A0JLT2 244 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 GOLGA6L9A6NEM1 432 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 POM121BA6NF01 834 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 C3orf70A6NLC5 250 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 ANKRD66B4E2M5 251 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 GPR89AB7ZAQ6 455 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 CACNB4O00305 520 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 ENC1O14682 589 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 WNT9AO14904 365 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 KRT86O43790 486 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 MMP20O60882 483 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PIAS2O75928 621 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TJP3O95049 919 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 RASGRP1O95267 797 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PGLSO95336 258 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 CPP00450 1065 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TNFP01375 233 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 ELFN1P0C7U0 828 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 GPR89BP0CG08 455 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PNLIPP16233 465 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 DGKAP23743 735 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 VIPR1P32241 457 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 HNF1BP35680 557 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 ABL2P42684 1182 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 CDKN2BP42772 138 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 METAP1P53582 386 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 EPHB1P54762 984 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 RWDD2BP57060 319 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TAS2R40P59535 323 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 KIAA1024LP59773 190 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 FAM193AP78312 1265 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PPARDQ03181 441 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 CLPPQ16740 277 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 ATP13A4Q4VNC1 1196 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TEX44Q53QW1 395 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PDPK2PQ6A1A2 396 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TXNRD3NBQ6F5E7 133 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 ESRP1Q6NXG1 681 aaKnown RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 GCNT7Q6ZNI0 430 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TMPRSS7Q7RTY8 843 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 KANSL1Q7Z3B3 1105 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 NT5DC3Q86UY8 548 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 SPATS2Q86XZ4 545 aaKnown RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 CAMK1DQ8IU85 385 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PQLC3Q8N755 202 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 UBL4BQ8N7F7 174 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 TFB1MQ8WVM0 346 aaKnown RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 BTBD6Q96KE9 485 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 SEMA3CQ99985 751 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 APOOQ9BUR5 198 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 MLPHQ9BV36 600 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 PACSIN1Q9BY11 444 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 FRMD8P1Q9BZ68 369 aaPredicted RBP6.42□□□□□ -1.38
USP54-202ENST00000413442 SLC13A1Q9BZW2 595 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 SLC25A51Q9H1U9 297 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 TRABDQ9H4I3 376 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 RMI1Q9H9A7 625 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 NOD2Q9HC29 1040 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 MAGEE1Q9HCI5 957 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 PCDH12Q9NPG4 1184 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 ETNK2Q9NVF9 386 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 HACD3Q9P035 362 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 AMFRQ9UKV5 643 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 WASF3Q9UPY6 502 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 CABIN1Q9Y6J0 2220 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 LRRK1Q38SD2 2015 aa6.42□□□□□ -1.38
USP54-202ENST00000413442 LAMA1P25391 3075 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 A0A0J9YYE9 177 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 FAM170AA1A519 330 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 KLHL33A6NCF5 533 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 LMO7DNF2Z398 122 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 APOC4-APOC2K7ER74 178 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PLK4O00444 970 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 ARHGAP6O43182 974 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 PSMD3O43242 534 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 AQP9O43315 295 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CST8O60676 142 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 KCNJ13O60928 360 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 RFPL3O75679 317 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 ANXA9O76027 345 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 RECQL5O94762 991 aaPredicted RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 STK10O94804 968 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 HEXIM1O94992 359 aaKnown RBP6.41□□□□□ -1.38
USP54-202ENST00000413442 TRBC1P01850 177 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 APOC2P02655 101 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 ANXA6P08133 673 aa6.41□□□□□ -1.38
USP54-202ENST00000413442 CD48P09326 243 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms