RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TMEM65Q6PI78 240 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 KYAT3Q6YP21 454 aaKnown RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 GLDNQ6ZMI3 551 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 TRIM72Q6ZMU5 477 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 Q6ZPA2 131 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 DCDC5Q6ZRR9 648 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ERN2Q76MJ5 926 aaKnown RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 GSTA5Q7RTV2 222 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 TADA2BQ86TJ2 420 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 LAS2Q8IYD9 372 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 SYCP3Q8IZU3 236 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 CPXM2Q8N436 756 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 C11orf65Q8NCR3 313 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ADPRHL1Q8NDY3 354 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 SPATA20Q8TB22 786 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 CAGE1Q8TC20 777 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 PSPC1Q8WXF1 523 aaKnown RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 C16orf45Q96MC5 204 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 CFAP57Q96MR6 1250 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 MACROD1Q9BQ69 325 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ANP32EQ9BTT0 268 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 KIFC3Q9BVG8 833 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 OSGEPL1Q9H4B0 414 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 MBNL1Q9NR56 388 aaKnown RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 SLC22A11Q9NSA0 550 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 INTS10Q9NVR2 710 aaKnown RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 NCKIPSDQ9NZQ3 722 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 OGFRQ9NZT2 677 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 SEMA5BQ9P283 1151 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 SLC17A6Q9P2U8 582 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 HAO1Q9UJM8 370 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 LIPT1Q9Y234 373 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 TRIM17Q9Y577 477 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 AOX1Q06278 1338 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 IGSF1Q8N6C5 1336 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 A0A1W2PRV1 198 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 FAM90A8PA6NJQ4 464 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 BTBD19C9JJ37 291 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 IFNL4K9M1U5 179 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 CLIC1O00299 241 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 MGST3O14880 152 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 FOXN1O15353 648 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PAPSS1O43252 624 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 HS6ST1O60243 411 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PRPSAP2O60256 369 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 AVILO75366 819 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 GCATO75600 419 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 JTBO76095 146 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TPPPO94811 219 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 GCNT3O95395 438 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 OLFM2O95897 454 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PENKP01210 267 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 GCP02774 474 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 SUPT20HL2P0C7V6 817 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 FAM90A13PP0C7W8 464 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 FAM90A24PP0C7X0 464 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 IGFBP2P18065 325 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TRIM21P19474 475 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TACR2P21452 398 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 NDUFS1P28331 727 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PRKCIP41743 596 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PIP4K2AP48426 406 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 CLK3P49761 638 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 CAMPP49913 170 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 AGTR2P50052 363 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 CCR3P51677 355 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 BMXP51813 675 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 EFNA5P52803 228 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 GALCP54803 685 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 HOXA4Q00056 320 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 GRAPQ13588 217 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TUBB2AQ13885 445 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 LARS2Q15031 903 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TAF7Q15545 349 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 HYAL4Q2M3T9 481 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 ZXDCQ2QGD7 858 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 SUPT20HL1Q3ZLR7 823 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 FBXO43Q4G163 708 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 VSTM1Q6UX27 236 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 C17orf99Q6UX52 265 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 SLC39A5Q6ZMH5 540 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 ADCK2Q7Z695 626 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PEX5LQ8IYB4 626 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 ELMOD3Q96FG2 381 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 RBM18Q96H35 190 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PDLIM5Q96HC4 596 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 CCDC17Q96LX7 622 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 UROC1Q96N76 676 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 FYTTD1Q96QD9 318 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TIMP4Q99727 224 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 DUSP26Q9BV47 211 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 TUBB2BQ9BVA1 445 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 GLIS2Q9BZE0 524 aaPredicted RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 PCED1AQ9H1Q7 454 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 C1orf21Q9H246 121 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 HRH4Q9H3N8 390 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 LIN28AQ9H9Z2 209 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 BABAM1Q9NWV8 329 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 ASIC5Q9NY37 505 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms