RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 TMEM110-MUSTN1A8MSY1 372 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 PRAMEF11O60813 436 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 ALPIP09923 528 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 WT1P19544 449 aaPredicted RBP12.96□□□□□ -0.33
PRAME-206ENST00000406503 ITIH1P19827 911 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 STAT1P42224 750 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 INHBCP55103 352 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 ZFP36L1Q07352 338 aaKnown RBP12.96□□□□□ -0.33
PRAME-206ENST00000406503 MTM1Q13496 603 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
PRAME-206ENST00000406503 GKN2Q86XP6 184 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 ARHGAP12Q8IWW6 846 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 ARFGAP1Q8N6T3 406 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 TSEN2Q8NCE0 465 aaKnown RBP12.96□□□□□ -0.33
PRAME-206ENST00000406503 CCL4L1Q8NHW4 92 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 COL26A1Q96A83 441 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 CELF6Q96J87 481 aaKnown RBP12.96□□□□□ -0.33
PRAME-206ENST00000406503 WDR92Q96MX6 357 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 GFM1Q96RP9 751 aaKnown RBP12.96□□□□□ -0.33
PRAME-206ENST00000406503 PEBP4Q96S96 227 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 SYT11Q9BT88 431 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 LGR4Q9BXB1 951 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 KLQ9UEF7 1012 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 DOLKQ9UPQ8 538 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 ATP8A1Q9Y2Q0 1164 aa12.96□□□□□ -0.33
PRAME-206ENST00000406503 DOPEY2Q9Y3R5 2298 aa12.96□□□□□ -0.34
PRAME-206ENST00000406503 CALB1P05937 261 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 CTSEP14091 401 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 KIAA1024LP59773 190 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 EIF3IQ13347 325 aaKnown RBP12.95□□□□□ -0.34
PRAME-206ENST00000406503 HLTFQ14527 1009 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRAME-206ENST00000406503 SYCP1Q15431 976 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
PRAME-206ENST00000406503 CERCAMQ5T4B2 595 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 AFMIDQ63HM1 303 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 BRAT1Q6PJG6 821 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 LIPIQ6XZB0 460 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 APTXQ7Z2E3 356 aaKnown RBP12.95□□□□□ -0.34
PRAME-206ENST00000406503 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 SLITRK4Q8IW52 837 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 TP53INP2Q8IXH6 220 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 NPWQ8N729 165 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
PRAME-206ENST00000406503 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 CATSPERBQ9H7T0 1116 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 TAS2R14Q9NYV8 317 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 APPL1Q9UKG1 709 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 RNF215Q9Y6U7 377 aa12.95□□□□□ -0.34
PRAME-206ENST00000406503 CFAP69A5D8W1 941 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 AGRPO00253 132 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 TRAFD1O14545 582 aaPredicted RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 FGF10O15520 208 aaPredicted RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 TNFP01375 233 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 GLB1P16278 677 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 ITGB6P18564 788 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 XPAP23025 273 aaPredicted RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 HTR1BP28222 390 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 TRIM23P36406 574 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 CSNK1DP48730 415 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 PAPOLAP51003 745 aaKnown RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 ARSDP51689 593 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 NDST2P52849 883 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 COPB1P53618 953 aaKnown RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 AIF1P55008 147 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 TPI1P60174 286 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 GRM3Q14832 879 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 DNAJC24Q6P3W2 148 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 SPRED1Q7Z699 444 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 SRLQ86TD4 932 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 MCOLN2Q8IZK6 566 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 OR56A4Q8NGH8 313 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 SCG3Q8WXD2 468 aaKnown RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 TUBGCP5Q96RT8 1024 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 KCTD15Q96SI1 283 aaPredicted RBP12.94□□□□□ -0.34
PRAME-206ENST00000406503 AGPAT1Q99943 283 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 CNPY3Q9BT09 278 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 TMEM168Q9H0V1 697 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 HSD3B7Q9H2F3 369 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 FOXJ2Q9P0K8 574 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 PISDQ9UG56 409 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 ST14Q9Y5Y6 855 aa12.94□□□□□ -0.34
PRAME-206ENST00000406503 PRAMEF33A0A0G2JMD5 474 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 C9orf172C9J069 976 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 NVLO15381 856 aaKnown RBP12.93□□□□□ -0.34
PRAME-206ENST00000406503 PRAMEF10O60809 474 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 FUCA1P04066 466 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 LIPCP11150 499 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 B4GALNT1Q00973 533 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 C16orf72Q14CZ0 275 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 C14orf28Q4W4Y0 310 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 ERAP2Q6P179 960 aa12.93□□□□□ -0.34
PRAME-206ENST00000406503 RBM43Q6ZSC3 357 aaKnown RBP12.93□□□□□ -0.34
PRAME-206ENST00000406503 DPPA4Q7L190 304 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms