RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 PLK2Q9NYY3 685 aa16.32■□□□□ 0.2
PARVB-203ENST00000404989 MARCH4Q9P2E8 410 aaPredicted RBP16.32■□□□□ 0.2
PARVB-203ENST00000404989 CORO1CQ9ULV4 474 aaPredicted RBP16.32■□□□□ 0.2
PARVB-203ENST00000404989 ACOT9Q9Y305 439 aa16.32■□□□□ 0.2
PARVB-203ENST00000404989 FCF1Q9Y324 198 aaKnown RBP16.32■□□□□ 0.2
PARVB-203ENST00000404989 PCDHGC4Q9Y5F7 938 aa16.32■□□□□ 0.2
PARVB-203ENST00000404989 RAI2Q9Y5P3 530 aa16.32■□□□□ 0.2
PARVB-203ENST00000404989 G3V2L1 256 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 K7ERQ8 282 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 RPP40O75818 363 aaKnown RBP16.31■□□□□ 0.2
PARVB-203ENST00000404989 S1PR4O95977 384 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 CYBBP04839 570 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 RB1P06400 928 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 RHOP08100 348 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 KCNA4P22459 653 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 HOXA9P31269 272 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 AVPR1AP37288 418 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 TAS2R39P59534 338 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 BNIP1Q12981 228 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 ARHGAP15Q53QZ3 475 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 FAM109BQ6ICB4 259 aaPredicted RBP16.31■□□□□ 0.2
PARVB-203ENST00000404989 MRNIPQ6NTE8 343 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 ZCCHC23Q6ZST2 131 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 CILP2Q8IUL8 1156 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 C10orf107Q8IVU9 208 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 MICALL1Q8N3F8 863 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 MDGA1Q8NFP4 955 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 GPR150Q8NGU9 434 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 OR6P1Q8NGX9 317 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 PPP4R1Q8TF05 950 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 ACDQ96AP0 544 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 OMDQ99983 421 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 TUBB6Q9BUF5 446 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 C2orf49Q9BVC5 232 aaPredicted RBP16.31■□□□□ 0.2
PARVB-203ENST00000404989 TASP1Q9H6P5 420 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 SUDS3Q9H7L9 328 aaPredicted RBP16.31■□□□□ 0.2
PARVB-203ENST00000404989 TXLNGQ9NUQ3 528 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 KCNK4Q9NYG8 393 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.31■□□□□ 0.2
PARVB-203ENST00000404989 ZMYM5Q9UJ78 669 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 INTS6Q9UL03 887 aaKnown RBP16.31■□□□□ 0.2
PARVB-203ENST00000404989 CAPN7Q9Y6W3 813 aa16.31■□□□□ 0.2
PARVB-203ENST00000404989 CCDC162PA2VCL2 907 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 CFAP73A6NFT4 308 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 GOT2P00505 430 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 SBK3P0C264 359 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 SAT1P21673 171 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 CD70P32970 193 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 ZNF140P52738 457 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 PLK1P53350 603 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 NTHL1P78549 312 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 ASPHQ12797 758 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 DLG1Q12959 904 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 PRSS36Q5K4E3 855 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 RBM20Q5T481 1227 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 ATG14Q6ZNE5 492 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 LDB1Q86U70 411 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 CENPLQ8N0S6 344 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 ELMO2Q96JJ3 720 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 GPR78Q96P69 363 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 NLE1Q9NVX2 485 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 HACD3Q9P035 362 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 KIAA1522Q9P206 1035 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 MYOFQ9NZM1 2061 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 C2orf81A6NN90 581 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 SMAD6O43541 496 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 ITM2AO43736 263 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 FZD6O60353 706 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 GLP2RO95838 553 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 HNRNPA1P09651 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
PARVB-203ENST00000404989 RALBP11234 206 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 OGNP20774 298 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 MAPK8P45983 427 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 RHOAP61586 193 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 SLC20A2Q08357 652 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 SEMA3AQ14563 771 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 ZNF460Q14592 562 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 TAF1AQ15573 450 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 HSF5Q4G112 596 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 ATXN7L2Q5T6C5 722 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 SDCCAG8Q86SQ7 713 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 WDR75Q8IWA0 830 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 TNS4Q8IZW8 715 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 ZNF557Q8N988 423 aaPredicted RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 LPCAT1Q8NF37 534 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 KCTD4Q8WVF5 259 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 RMDN1Q96DB5 314 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 CDKN2AIPNLQ96HQ2 116 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 STN1Q9H668 368 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 DPP7Q9UHL4 492 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
PARVB-203ENST00000404989 RUVBL2Q9Y230 463 aaKnown RBP16.3■□□□□ 0.2
PARVB-203ENST00000404989 A0A0G2JND7 137 aa16.29■□□□□ 0.2
PARVB-203ENST00000404989 TMEM114B3SHH9 223 aa16.29■□□□□ 0.2
PARVB-203ENST00000404989 ANKRD66B4E2M5 251 aa16.29■□□□□ 0.2
PARVB-203ENST00000404989 TARM1B6A8C7 271 aa16.29■□□□□ 0.2
PARVB-203ENST00000404989 HNRNPCL1O60812 293 aaKnown RBP16.29■□□□□ 0.2
PARVB-203ENST00000404989 MYL2P10916 166 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms