RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 HIST1H2ADP20671 130 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 CDC25CP30307 473 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.03
MCF2L-205ENST00000397017 MSX2P35548 267 aaPredicted RBP15.27■□□□□ 0.03
MCF2L-205ENST00000397017 DOK6Q6PKX4 331 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 ANGPTL8Q6UXH0 198 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 SORCS1Q8WY21 1168 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 HIST1H2AHQ96KK5 128 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 OLFM3Q96PB7 478 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 HIST1H2AJQ99878 128 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 EBF4Q9BQW3 602 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 H2AFJQ9BTM1 129 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 SUN2Q9UH99 717 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 USP3Q9Y6I4 520 aa15.27■□□□□ 0.03
MCF2L-205ENST00000397017 CCDC160A6NGH7 325 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 ITM2AO43736 263 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 PCDH8O95206 1070 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 HLA-DPA1P20036 260 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 HECTD2Q5U5R9 776 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 MRPL46Q9H2W6 279 aaKnown RBP15.26■□□□□ 0.03
MCF2L-205ENST00000397017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.26■□□□□ 0.03
MCF2L-205ENST00000397017 COPG2Q9UBF2 871 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 STARD13Q9Y3M8 1113 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 FAM159BA6NKW6 160 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CHRNGP07510 517 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 TSHRP16473 764 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 ACOX1Q15067 660 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CCDC153Q494R4 210 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 TEDDM1Q5T9Z0 273 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 TPGS2Q68CL5 300 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 FSTL5Q8N475 847 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-205ENST00000397017 FBXO39Q8N4B4 442 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 TUBB6Q9BUF5 446 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CCDC167Q9P0B6 97 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 IQCF5A8MTL0 148 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 AXIN1O15169 862 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 NVLO15381 856 aaKnown RBP15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CCNT2O60583 730 aaKnown RBP15.26■□□□□ 0.03
MCF2L-205ENST00000397017 MTX2O75431 263 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 RBP1P09455 135 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CRABP2P29373 138 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CLDN19Q8N6F1 224 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 TOP1MTQ969P6 601 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 ACOX2Q99424 681 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 CXXC1Q9P0U4 656 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-205ENST00000397017 BTRCQ9Y297 605 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 LOXHD1Q8IVV2 1947 aa15.26■□□□□ 0.03
MCF2L-205ENST00000397017 A8MUI8 341 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 E7ESA3 106 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SCAMP1O15126 338 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 PDHA1P08559 390 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 CRHR1P34998 444 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 PIK3CGP48736 1102 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 CLNS1AP54105 237 aaKnown RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SCAPQ12770 1279 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 TSNAXIP1Q2TAA8 658 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SERPINA13PQ6UXR4 307 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 ARCQ7LC44 396 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 TEX9Q8N6V9 391 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 PSME4Q14997 1843 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 CFAP73A6NFT4 308 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 F8W8V4 182 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 LTA4HP09960 611 aaKnown RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 MYOGP15173 224 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 NFKBIAP25963 317 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SLC6A4P31645 630 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SNRPD1P62314 119 aaKnown RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SLC25A3Q00325 362 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 MSANTD2Q6P1R3 559 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 GPR21Q99679 349 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 TRIM54Q9BYV2 358 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 ATP13A3Q9H7F0 1226 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 TET1Q8NFU7 2136 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 MAP1BP46821 2468 aaKnown RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 TP73O15350 636 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 ALDOAP04075 364 aaKnown RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 APOA4P06727 396 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 MAPKAPK2P49137 400 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SERINC3Q13530 473 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 HEXDCQ8WVB3 486 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 SH3KBP1Q96B97 665 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 MTFMTQ96DP5 389 aaKnown RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 MRGPRX2Q96LB1 330 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 LRGUKQ96M69 825 aa15.25■□□□□ 0.03
MCF2L-205ENST00000397017 GATA5Q9BWX5 397 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-205ENST00000397017 PRR5-ARHGAP8B1AHC4 643 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 TCEA3O75764 348 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 ARSDP51689 593 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 COPAP53621 1224 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 ARHGAP8P85298 464 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 TAF11Q15544 211 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 ARL13AQ5H913 290 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-205ENST00000397017 FAM26DQ5JW98 314 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 Q6ZVU0 165 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 ARHGAP12Q8IWW6 846 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 MYO19Q96H55 970 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 MTG2Q9H4K7 406 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 SYTL2Q9HCH5 934 aa15.24■□□□□ 0.03
MCF2L-205ENST00000397017 CASS4Q9NQ75 786 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms