RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TBC1D25Q3MII6 688 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 MAMDC4Q6UXC1 1216 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 FRA10AC1Q70Z53 315 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 TMEM110Q86TL2 294 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 TTC39CQ8N584 583 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 KHSRPQ92945 711 aaKnown RBP eCLIP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 MTFMTQ96DP5 389 aaKnown RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 KCNA7Q96RP8 456 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PIGVQ9NUD9 493 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 DNAJC28Q9NX36 388 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 NUP214P35658 2090 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 A0A087WXM4 84 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 TMX2-CTNND1H3BSU7 103 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 KLF11O14901 512 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 GCATO75600 419 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PTPN3P26045 913 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 HSPA13P48723 471 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 RAB10P61026 200 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 KLHL35Q6PF15 583 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 ARHGAP36Q6ZRI8 547 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PIM3Q86V86 326 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 LILRA2Q8N149 483 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 ACMSDQ8TDX5 336 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 WNT8BQ93098 351 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 HDAC10Q969S8 669 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PAAF1Q9BRP4 392 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 GID8Q9NWU2 228 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 MORF4L1Q9UBU8 362 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 EVLQ9UI08 416 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 A0A0J9YVX5 310 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 CPB1P15086 417 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF157P51786 506 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 ITGA7Q13683 1181 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 TRIM25Q14258 630 aaKnown RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 C11orf91Q3C1V1 193 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 MGAT5BQ3V5L5 792 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PGAM4Q8N0Y7 254 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 ADCY4Q8NFM4 1077 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 TMEM74Q96NL1 305 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 QKIQ96PU8 341 aaKnown RBP eCLIP13.28□□□□□ -0.284e-6■■□□□ 12
NFKB1-202ENST00000394820 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PRG3Q9Y2Y8 225 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 A0A0J9YYE9 177 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 PLOD2O00469 737 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 MYL4P12829 197 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 MATKP42679 507 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 BRCC3P46736 316 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 IL5RAQ01344 420 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 SAMD4BQ5PRF9 694 aaKnown RBP13.27□□□□□ -0.28
NFKB1-202ENST00000394820 IQSEC1Q6DN90 963 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 EPGNQ6UW88 154 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 FNDC5Q8NAU1 212 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 KBTBD7Q8WVZ9 684 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 MARCH7Q9H992 704 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 LIMD1Q9UGP4 676 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 TRAF6Q9Y4K3 522 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 ORC6Q9Y5N6 252 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 NRCAMQ92823 1304 aa13.27□□□□□ -0.28
NFKB1-202ENST00000394820 FFAR3O14843 346 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 GPR42O15529 346 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 HS6ST1O60243 411 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 H6PDO95479 791 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 HMOX2P30519 316 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 FMO4P31512 558 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 CD86P42081 329 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 CLCNKBP51801 687 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 UBE3AQ05086 875 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 TRIP11Q15643 1979 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 RABL3Q5HYI8 236 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 SPESP1Q6UW49 350 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 METTL25Q8N6Q8 603 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 DHRS4Q9BTZ2 278 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 BRD8Q9H0E9 1235 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 MIR1-1HGQ9H1L0 117 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 ADAMTS10Q9H324 1103 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 RNF112Q9ULX5 631 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 MDM4O15151 490 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
NFKB1-202ENST00000394820 NPR3P17342 541 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 SLC5A2P31639 672 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 ADRA1BP35368 520 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 SEPHS1P49903 392 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
NFKB1-202ENST00000394820 LAPTM4AQ15012 233 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF554Q86TJ5 538 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 CDYL2Q8N8U2 506 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 CLHC1Q8NHS4 586 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 BTBD9Q96Q07 612 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 PTPN18Q99952 460 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 RRAGCQ9HB90 399 aa13.27□□□□□ -0.29
NFKB1-202ENST00000394820 NOBOXO60393 691 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 CABYRO75952 493 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 FKBP9O95302 570 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 DLGAP3O95886 979 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 TSHRP16473 764 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 TPSB2P20231 275 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 NDST2P52849 883 aa13.26□□□□□ -0.29
NFKB1-202ENST00000394820 ZNF235Q14590 738 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms