RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 DNAJC28Q9NX36 388 aa10.03□□□□□ -0.8
PSEN1-204ENST00000394164 GIN1Q9NXP7 522 aa10.03□□□□□ -0.8
PSEN1-204ENST00000394164 SLC39A10Q9ULF5 831 aa10.03□□□□□ -0.8
PSEN1-204ENST00000394164 VANGL2Q9ULK5 521 aa10.03□□□□□ -0.8
PSEN1-204ENST00000394164 PADI4Q9UM07 663 aa10.03□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF839A8K0R7 811 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 PHGDHO43175 533 aaKnown RBP10.02□□□□□ -0.8
PSEN1-204ENST00000394164 CHRNA1P02708 482 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 POLBP06746 335 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 TSHRP16473 764 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 HDCP19113 662 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 WARSP23381 471 aaKnown RBP10.02□□□□□ -0.8
PSEN1-204ENST00000394164 JAK1P23458 1154 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 SPIDRQ14159 915 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 PITRM1Q5JRX3 1037 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 IGFN1Q86VF2 1251 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF354CQ86Y25 554 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 TDRD5Q8NAT2 981 aaKnown RBP10.02□□□□□ -0.8
PSEN1-204ENST00000394164 IPMKQ8NFU5 416 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 CHPT1Q8WUD6 406 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 SGF29Q96ES7 293 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 CERS2Q96G23 380 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 FBXL20Q96IG2 436 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 APBA2Q99767 749 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 MTG1Q9BT17 334 aaPredicted RBP10.02□□□□□ -0.8
PSEN1-204ENST00000394164 WDR6Q9NNW5 1121 aaKnown RBP10.02□□□□□ -0.8
PSEN1-204ENST00000394164 POLE4Q9NR33 117 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 BCAP29Q9UHQ4 241 aa10.02□□□□□ -0.8
PSEN1-204ENST00000394164 PSMD11O00231 422 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-204ENST00000394164 TOR1BO14657 336 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 AKAP10O43572 662 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 PGAM1P18669 254 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 CD68P34810 354 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-204ENST00000394164 MAPK11Q15759 364 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 BCL2A1Q16548 175 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 PCSK7Q16549 785 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 NOMO2Q5JPE7 1267 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 AGMOQ6ZNB7 445 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 VASH1Q7L8A9 365 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-204ENST00000394164 TAC4Q86UU9 113 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 LRRTM3Q86VH5 581 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 HERC6Q8IVU3 1022 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 TOP6BLQ8N6T0 577 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 CAPSLQ8WWF8 208 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 NPLQ9BXD5 320 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-204ENST00000394164 CEP44Q9C0F1 390 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 SNX15Q9NRS6 342 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 MPP6Q9NZW5 540 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 SLC8A2Q9UPR5 921 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 SLC27A5Q9Y2P5 690 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 SPO11Q9Y5K1 396 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 SQORQ9Y6N5 450 aa10.02□□□□□ -0.81
PSEN1-204ENST00000394164 A0A087WXM4 84 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 DCLK1O15075 740 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 MGEA5O60502 916 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 PMPCBO75439 489 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 SULT1C4O75897 302 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 NMBRP28336 390 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 MLLT10P55197 1068 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 TXNL4AP83876 142 aaKnown RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 DPYSQ14117 519 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 PTK2BQ14289 1009 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 MORN1Q5T089 497 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 DEPDC1Q5TB30 811 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 DSG4Q86SJ6 1040 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 CADM3Q8N126 398 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 TRPV1Q8NER1 839 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 LRRC39Q96DD0 335 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 MLPHQ9BV36 600 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 FRMD8Q9BZ67 464 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 VPS45Q9NRW7 570 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 BFARQ9NZS9 450 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 CCL22O00626 93 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 GMNNO75496 209 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 CTGFP29279 349 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 AXLP30530 894 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 MAGEA6P43360 314 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 GSSP48637 474 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 ARPP19P56211 112 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 CDC42EP1Q00587 391 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 CTBP1Q13363 440 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 PLCL1Q15111 1095 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 LSM12Q3MHD2 195 aaKnown RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 FSTL4Q6MZW2 842 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 GK5Q6ZS86 529 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 SIX5Q8N196 739 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 BPIFB6Q8NFQ5 453 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 ZNF597Q96LX8 424 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 ZIC5Q96T25 663 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 CDH19Q9H159 772 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 AURKCQ9UQB9 309 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 RGSL1A5PLK6 1076 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 B4GAT1O43505 415 aa10.01□□□□□ -0.81
PSEN1-204ENST00000394164 NOL3O60936 208 aaKnown RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 JUNP05412 331 aaKnown RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
PSEN1-204ENST00000394164 EEF1B2P24534 225 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms