RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 STRA8Q7Z7C7 330 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 PHTF2Q8N3S3 785 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 TERB1Q8NA31 727 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 MDGA1Q8NFP4 955 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 OR2A12Q8NGT7 310 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 PIH1D2Q8WWB5 315 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 MTBPQ96DY7 904 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 HACD3Q9P035 362 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 RIMKLBQ9ULI2 386 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 PLA2G4CQ9UP65 541 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 C5orf42Q9H799 3197 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 C2orf81A6NN90 581 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 WASH3PC4AMC7 463 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 ANHXE9PGG2 379 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 AURKAO14965 403 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 TIMM44O43615 452 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 BUD23O43709 281 aaKnown RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 EIF2DP41214 584 aaKnown RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 ABL2P42684 1182 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 PPARDQ03181 441 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 ACVR1Q04771 509 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 MROH9Q5TGP6 573 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 NAIF1Q69YI7 327 aaPredicted RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 CNTN4Q8IWV2 1026 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 C4orf33Q8N1A6 199 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 CHST14Q8NCH0 376 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 VOPP1Q96AW1 172 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 DNAJC1Q96KC8 554 aaKnown RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 FAM167BQ9BTA0 163 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 SUV39H2Q9H5I1 410 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 KCNK9Q9NPC2 374 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 GRXCR2A6NFK2 248 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 ARNTLO00327 626 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 SLC7A4O43246 635 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 SLC4A1P02730 911 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 CTPS1P17812 591 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 KRT4P19013 534 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 ARSDP51689 593 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 TMPRSS15P98073 1019 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 DMTNQ08495 405 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 PREPLQ4J6C6 727 aaPredicted RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 NEPROQ6NW34 567 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 OR6P1Q8NGX9 317 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 GABPB2Q8TAK5 448 aaPredicted RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 CALML6Q8TD86 181 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 PTPRN2Q92932 1015 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 ZNF641Q96N77 438 aaPredicted RBP13.68□□□□□ -0.22
HOXA1-202ENST00000355633 RBBP8Q99708 897 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 HEPHQ9BQS7 1158 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 MAGEE1Q9HCI5 957 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 GGT7Q9UJ14 662 aa13.68□□□□□ -0.22
HOXA1-202ENST00000355633 TRIOBPQ9H2D6 2365 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 A0A0J9YYE9 177 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 TMEM120BA0PK00 339 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 HMX2A2RU54 273 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 TBC1D3BA6NDS4 549 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 CCL22O00626 93 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 SIN3BO75182 1162 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 RPP40O75818 363 aaKnown RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 TRBC1P01850 177 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 UGT2B4P06133 528 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 ITGA2BP08514 1039 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 ALPIP09923 528 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 LPOP22079 712 aaPredicted RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 KCNA5P22460 613 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 ZNF140P52738 457 aaPredicted RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 LIMK2P53671 638 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 CSE1LP55060 971 aaKnown RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 PDE1BQ01064 536 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 PTPRCAPQ14761 206 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 PTPRRQ15256 657 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 ZNF470Q6ECI4 717 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 UCMAQ8WVF2 138 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 ECHDC3Q96DC8 303 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 SERAC1Q96JX3 654 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 TBATAQ96M53 351 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 MFSD1Q9H3U5 465 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 UBE2ZQ9H832 354 aaPredicted RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 NLE1Q9NVX2 485 aaPredicted RBP13.67□□□□□ -0.22
HOXA1-202ENST00000355633 PHTF1Q9UMS5 762 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 ZNF711Q9Y462 761 aa13.67□□□□□ -0.22
HOXA1-202ENST00000355633 A0A1W2PQ67 120 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 GOLGA8RI6L899 631 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SPAG7O75391 227 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 BMP1P13497 986 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 DNAJC3Q13217 504 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CTBP1Q13363 440 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 SMAD4Q13485 552 aaKnown RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
HOXA1-202ENST00000355633 UGP2Q16851 508 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 GDPD4Q6W3E5 623 aa13.66□□□□□ -0.22
HOXA1-202ENST00000355633 PTAR1Q7Z6K3 402 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms