RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 TSR3Q9UJK0 312 aaKnown RBP11.9□□□□□ -0.5
APP-201ENST00000346798 MYRFQ9Y2G1 1151 aa11.9□□□□□ -0.5
APP-201ENST00000346798 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
APP-201ENST00000346798 CCL15-CCL14A0A0B4J2E2 113 aa11.9□□□□□ -0.51
APP-201ENST00000346798 F8W810 466 aa11.9□□□□□ -0.51
APP-201ENST00000346798 KPNA2P52292 529 aaKnown RBP11.9□□□□□ -0.51
APP-201ENST00000346798 AIF1P55008 147 aa11.9□□□□□ -0.51
APP-201ENST00000346798 CDKN2DP55273 166 aa11.9□□□□□ -0.51
APP-201ENST00000346798 POU4F1Q01851 419 aa11.9□□□□□ -0.51
APP-201ENST00000346798 DSC2Q02487 901 aa11.9□□□□□ -0.51
APP-201ENST00000346798 CCL15Q16663 113 aa11.9□□□□□ -0.51
APP-201ENST00000346798 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.51
APP-201ENST00000346798 BHLHA9Q7RTU4 235 aa11.9□□□□□ -0.51
APP-201ENST00000346798 RETREG3Q86VR2 466 aa11.9□□□□□ -0.51
APP-201ENST00000346798 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.51
APP-201ENST00000346798 DDI1Q8WTU0 396 aa11.9□□□□□ -0.51
APP-201ENST00000346798 NSUN5Q96P11 429 aaKnown RBP11.9□□□□□ -0.51
APP-201ENST00000346798 PPP1R10Q96QC0 940 aaKnown RBP11.9□□□□□ -0.51
APP-201ENST00000346798 FCRL5Q96RD9 977 aa11.9□□□□□ -0.51
APP-201ENST00000346798 EFHD1Q9BUP0 239 aa11.9□□□□□ -0.51
APP-201ENST00000346798 SOX17Q9H6I2 414 aaPredicted RBP11.9□□□□□ -0.51
APP-201ENST00000346798 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.51
APP-201ENST00000346798 MARCH4Q9P2E8 410 aaPredicted RBP11.9□□□□□ -0.51
APP-201ENST00000346798 RGS17Q9UGC6 210 aaPredicted RBP11.9□□□□□ -0.51
APP-201ENST00000346798 RAD54BQ9Y620 910 aa11.9□□□□□ -0.51
APP-201ENST00000346798 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.51
APP-201ENST00000346798 A0A087X1B8 175 aa11.89□□□□□ -0.51
APP-201ENST00000346798 NCF1BA6NI72 391 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 NCF1CA8MVU1 366 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 BTBD19C9JJ37 291 aa11.89□□□□□ -0.51
APP-201ENST00000346798 J3KR12 359 aa11.89□□□□□ -0.51
APP-201ENST00000346798 H6PDO95479 791 aa11.89□□□□□ -0.51
APP-201ENST00000346798 NCF1P14598 390 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 CCNCP24863 283 aa11.89□□□□□ -0.51
APP-201ENST00000346798 ADSLP30566 484 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 STT3AP46977 705 aa11.89□□□□□ -0.51
APP-201ENST00000346798 LHX1P48742 406 aa11.89□□□□□ -0.51
APP-201ENST00000346798 FOXA1P55317 472 aa11.89□□□□□ -0.51
APP-201ENST00000346798 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
APP-201ENST00000346798 HPCAP84074 193 aa11.89□□□□□ -0.51
APP-201ENST00000346798 ECT2LQ008S8 904 aa11.89□□□□□ -0.51
APP-201ENST00000346798 APOFQ13790 326 aa11.89□□□□□ -0.51
APP-201ENST00000346798 RFTN1Q14699 578 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 MAPRE2Q15555 327 aa11.89□□□□□ -0.51
APP-201ENST00000346798 PFKFB4Q16877 469 aa11.89□□□□□ -0.51
APP-201ENST00000346798 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
APP-201ENST00000346798 POTEHQ6S545 545 aa11.89□□□□□ -0.51
APP-201ENST00000346798 CLVS1Q8IUQ0 354 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 CPNE9Q8IYJ1 553 aa11.89□□□□□ -0.51
APP-201ENST00000346798 OFCC1Q8IZS5 231 aa11.89□□□□□ -0.51
APP-201ENST00000346798 DCBLD1Q8N8Z6 715 aa11.89□□□□□ -0.51
APP-201ENST00000346798 CASP10Q92851 521 aa11.89□□□□□ -0.51
APP-201ENST00000346798 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
APP-201ENST00000346798 ENTPD7Q9NQZ7 604 aa11.89□□□□□ -0.51
APP-201ENST00000346798 SUCOQ9UBS9 1254 aaKnown RBP11.89□□□□□ -0.51
APP-201ENST00000346798 RSL24D1Q9UHA3 163 aaKnown RBP11.89□□□□□ -0.51
APP-201ENST00000346798 CPA4Q9UI42 421 aa11.89□□□□□ -0.51
APP-201ENST00000346798 A0A0J9YYE9 177 aa11.89□□□□□ -0.51
APP-201ENST00000346798 HHLA1C9JL84 531 aa11.89□□□□□ -0.51
APP-201ENST00000346798 MATN3O15232 486 aa11.89□□□□□ -0.51
APP-201ENST00000346798 SLC22A2O15244 555 aa11.89□□□□□ -0.51
APP-201ENST00000346798 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 HMBSP08397 361 aa11.89□□□□□ -0.51
APP-201ENST00000346798 ALDOCP09972 364 aaKnown RBP11.89□□□□□ -0.51
APP-201ENST00000346798 LINC00032P0C843 101 aa11.89□□□□□ -0.51
APP-201ENST00000346798 GRIK1P39086 918 aa11.89□□□□□ -0.51
APP-201ENST00000346798 TBC1D25Q3MII6 688 aa11.89□□□□□ -0.51
APP-201ENST00000346798 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
APP-201ENST00000346798 C6orf10Q5SRN2 563 aa11.89□□□□□ -0.51
APP-201ENST00000346798 PM20D1Q6GTS8 502 aa11.89□□□□□ -0.51
APP-201ENST00000346798 TMEM207Q6UWW9 146 aa11.89□□□□□ -0.51
APP-201ENST00000346798 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
APP-201ENST00000346798 BLOC1S5Q8TDH9 187 aa11.89□□□□□ -0.51
APP-201ENST00000346798 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
APP-201ENST00000346798 SLC25A23Q9BV35 468 aa11.89□□□□□ -0.51
APP-201ENST00000346798 EPB41L1Q9H4G0 881 aa11.89□□□□□ -0.51
APP-201ENST00000346798 AKTIPQ9H8T0 292 aa11.89□□□□□ -0.51
APP-201ENST00000346798 VWA7Q9Y334 891 aa11.89□□□□□ -0.51
APP-201ENST00000346798 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.89□□□□□ -0.51
APP-201ENST00000346798 TMX2-CTNND1H3BSU7 103 aa11.88□□□□□ -0.51
APP-201ENST00000346798 PSMD3O43242 534 aa11.88□□□□□ -0.51
APP-201ENST00000346798 MTHFD1P11586 935 aaKnown RBP11.88□□□□□ -0.51
APP-201ENST00000346798 NCK1P16333 377 aa11.88□□□□□ -0.51
APP-201ENST00000346798 PSEN2P49810 448 aa11.88□□□□□ -0.51
APP-201ENST00000346798 CSRP3P50461 194 aa11.88□□□□□ -0.51
APP-201ENST00000346798 HK2P52789 917 aa11.88□□□□□ -0.51
APP-201ENST00000346798 SH3BGRP55822 239 aaPredicted RBP11.88□□□□□ -0.51
APP-201ENST00000346798 PLIN5Q00G26 463 aa11.88□□□□□ -0.51
APP-201ENST00000346798 PRKCQQ04759 706 aa11.88□□□□□ -0.51
APP-201ENST00000346798 SLC10A7Q0GE19 358 aa11.88□□□□□ -0.51
APP-201ENST00000346798 GRB7Q14451 532 aa11.88□□□□□ -0.51
APP-201ENST00000346798 SAMD4BQ5PRF9 694 aaKnown RBP11.88□□□□□ -0.51
APP-201ENST00000346798 LRRTM3Q86VH5 581 aa11.88□□□□□ -0.51
APP-201ENST00000346798 PTGR2Q8N8N7 351 aaPredicted RBP11.88□□□□□ -0.51
APP-201ENST00000346798 DNAJB14Q8TBM8 379 aa11.88□□□□□ -0.51
APP-201ENST00000346798 TUBGCP3Q96CW5 907 aa11.88□□□□□ -0.51
APP-201ENST00000346798 C19orf60Q96EN9 201 aa11.88□□□□□ -0.51
APP-201ENST00000346798 HSPBAP1Q96EW2 488 aa11.88□□□□□ -0.51
APP-201ENST00000346798 OSBPL11Q9BXB4 747 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms