RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CCDC42Q96M95 316 aa20.26■□□□□ 0.83
SYNE2-201ENST00000341472 ABCG4Q9H172 646 aa20.26■□□□□ 0.83
SYNE2-201ENST00000341472 ZZEF1O43149 2961 aa20.26■□□□□ 0.83
SYNE2-201ENST00000341472 APC2O95996 2303 aa20.26■□□□□ 0.83
SYNE2-201ENST00000341472 CPED1A4D0V7 1026 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 LMO7DNF2Z398 122 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 HTRA2O43464 458 aaPredicted RBP20.25■□□□□ 0.83
SYNE2-201ENST00000341472 OPA1O60313 960 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 SOCS5O75159 536 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 PCCBP05166 539 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 GP1BAP07359 652 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 ANXA6P08133 673 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 TMEM253P0C7T8 217 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 ELFN1P0C7U0 828 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 MMP13P45452 471 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 TAS2R40P59535 323 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 MTM1Q13496 603 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 DPYSL3Q14195 570 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 NFATC4Q14934 902 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 PAFAH1B3Q15102 231 aaKnown RBP20.25■□□□□ 0.83
SYNE2-201ENST00000341472 ANKRD20A8PQ5CZ79 823 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 RALGPS1Q5JS13 557 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 HID1Q8IV36 788 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 DCBLD1Q8N8Z6 715 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 PCDH19Q8TAB3 1148 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 SPOCK2Q92563 424 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 GLMNQ92990 594 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 TSACCQ96A04 125 aaPredicted RBP20.25■□□□□ 0.83
SYNE2-201ENST00000341472 CHP1Q99653 195 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 MGME1Q9BQP7 344 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 PNMA8BQ9ULN7 279 aaPredicted RBP20.25■□□□□ 0.83
SYNE2-201ENST00000341472 PHTF1Q9UMS5 762 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 RAXQ9Y2V3 346 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 OR1A2Q9Y585 309 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 AK5Q9Y6K8 562 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 DMXL2Q8TDJ6 3036 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 ACACAQ13085 2346 aa20.25■□□□□ 0.83
SYNE2-201ENST00000341472 COL5A1P20908 1838 aaPredicted RBP20.25■□□□□ 0.83
SYNE2-201ENST00000341472 LY6G6EA0A0G2JKS1 128 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 YY2O15391 372 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 RASGRP1O95267 797 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 CTSEP14091 401 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 TSHRP16473 764 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 NFKBIAP25963 317 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 RPIAP49247 311 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 HK3P52790 923 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 MAXP61244 160 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 MESDQ14696 234 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 ACOX1Q15067 660 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 NR0B2Q15466 257 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 RD3Q7Z3Z2 195 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 FSTL5Q8N475 847 aaPredicted RBP20.24■□□□□ 0.83
SYNE2-201ENST00000341472 TEX26Q8N6G2 289 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 NXPE2Q96DL1 559 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 ZNF670Q9BS34 389 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 NRSN2Q9GZP1 204 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 NHEJ1Q9H9Q4 299 aaPredicted RBP20.24■□□□□ 0.83
SYNE2-201ENST00000341472 ABHD10Q9NUJ1 306 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 B4GALT6Q9UBX8 382 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 U3KQA8 63 aa20.24■□□□□ 0.83
SYNE2-201ENST00000341472 MAN1A1P33908 653 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 GARSP41250 739 aaKnown RBP20.23■□□□□ 0.83
SYNE2-201ENST00000341472 SRP54P61011 504 aaKnown RBP20.23■□□□□ 0.83
SYNE2-201ENST00000341472 ITKQ08881 620 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 GALNT2Q10471 571 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 ELOCQ15369 112 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 CDKN3Q16667 212 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 ALG11Q2TAA5 492 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 EFL1Q7Z2Z2 1120 aaKnown RBP20.23■□□□□ 0.83
SYNE2-201ENST00000341472 PLA2G15Q8NCC3 412 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 SLC35G2Q8TBE7 412 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 IFI44Q8TCB0 444 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 MAPK15Q8TD08 544 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 SCG3Q8WXD2 468 aaKnown RBP20.23■□□□□ 0.83
SYNE2-201ENST00000341472 WDR92Q96MX6 357 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 LRRC61Q9BV99 259 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 CLPBQ9H078 707 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 NT5MQ9NPB1 228 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 DOLKQ9UPQ8 538 aa20.23■□□□□ 0.83
SYNE2-201ENST00000341472 CACNB4O00305 520 aaPredicted RBP20.22■□□□□ 0.83
SYNE2-201ENST00000341472 MATN3O15232 486 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 MFAP3LO75121 409 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 CPP00450 1065 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 TNFP01375 233 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 HOXC4P09017 264 aaPredicted RBP20.22■□□□□ 0.83
SYNE2-201ENST00000341472 VIPR1P32241 457 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 TRAF2Q12933 501 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 RTP5Q14D33 572 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 IFI16Q16666 785 aaKnown RBP20.22■□□□□ 0.83
SYNE2-201ENST00000341472 ARMC12Q5T9G4 340 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 CDCP2Q5VXM1 449 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 NCBP2-AS2Q69YL0 99 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 TIGD7Q6NT04 549 aaPredicted RBP20.22■□□□□ 0.83
SYNE2-201ENST00000341472 LVRNQ6Q4G3 990 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 TSGA13Q96PP4 275 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 SEMA3CQ99985 751 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 BOCQ9BWV1 1114 aa20.22■□□□□ 0.83
SYNE2-201ENST00000341472 RBM22Q9NW64 420 aaKnown RBP eCLIP20.22■□□□□ 0.83
SYNE2-201ENST00000341472 KLQ9UEF7 1012 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms