RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TNKS2Q9H2K2 1166 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 C12orf65Q9H3J6 166 aaKnown RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 SNX15Q9NRS6 342 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 NLE1Q9NVX2 485 aaPredicted RBP15.53■□□□□ 0.08
LIMS1-202ENST00000338045 HACD3Q9P035 362 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 PCDHB9Q9Y5E1 797 aa15.53■□□□□ 0.08
LIMS1-202ENST00000338045 HEPACAM2A8MVW5 462 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 AURKAO14965 403 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 CISD3P0C7P0 127 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 TAC1P20366 129 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 TYK2P29597 1187 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 SLC8A1P32418 973 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 POLD2P49005 469 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 VASPP50552 380 aaPredicted RBP15.52■□□□□ 0.08
LIMS1-202ENST00000338045 PRAMEP78395 509 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 MPP1Q00013 466 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 BCL2L1Q07817 233 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 ADAM15Q13444 863 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 GRM3Q14832 879 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 SEPT7Q16181 437 aaKnown RBP15.52■□□□□ 0.08
LIMS1-202ENST00000338045 ARMC12Q5T9G4 340 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 MBLAC2Q68D91 279 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 TRIM68Q6AZZ1 485 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 CILP2Q8IUL8 1156 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 PLPP6Q8IY26 295 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 LRRC34Q8IZ02 419 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 OR13C4Q8NGS5 318 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 OR6K2Q8NGY2 324 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 ZNF473Q8WTR7 871 aaKnown RBP15.52■□□□□ 0.08
LIMS1-202ENST00000338045 PDCD6IPQ8WUM4 868 aaKnown RBP15.52■□□□□ 0.08
LIMS1-202ENST00000338045 PIH1D2Q8WWB5 315 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 ATXN7L3BQ96GX2 97 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 MYO19Q96H55 970 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 FAM111AQ96PZ2 611 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 PAIP2Q9BPZ3 127 aaKnown RBP15.52■□□□□ 0.08
LIMS1-202ENST00000338045 FAM83CQ9BQN1 747 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 CDH7Q9ULB5 785 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 SLC27A6Q9Y2P4 619 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 MYO9BQ13459 2157 aa15.52■□□□□ 0.08
LIMS1-202ENST00000338045 PRRC2BQ5JSZ5 2229 aaKnown RBP15.52■□□□□ 0.08
LIMS1-202ENST00000338045 TCP11X1B4DZS4 312 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 TRIM24O15164 1050 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 NFATC1O95644 943 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 ABCG1P45844 678 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 LEPRP48357 1165 aaKnown RBP15.52■□□□□ 0.07
LIMS1-202ENST00000338045 PTPRCAPQ14761 206 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 GEN1Q17RS7 908 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 INSCQ1MX18 579 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 ZNF771Q7L3S4 317 aaPredicted RBP15.52■□□□□ 0.07
LIMS1-202ENST00000338045 ETFBKMTQ8IXQ9 262 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 TTC30BQ8N4P2 665 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 NAT16Q8N8M0 369 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 ACVR1CQ8NER5 493 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 GPR150Q8NGU9 434 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 CABS1Q96KC9 395 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 SMIM14Q96QK8 99 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 TUBGCP5Q96RT8 1024 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 CPEB1Q9BZB8 566 aaKnown RBP15.52■□□□□ 0.07
LIMS1-202ENST00000338045 IQCGQ9H095 443 aaKnown RBP15.52■□□□□ 0.07
LIMS1-202ENST00000338045 ATP13A3Q9H7F0 1226 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 MAGEE1Q9HCI5 957 aa15.52■□□□□ 0.07
LIMS1-202ENST00000338045 KIF26AQ9ULI4 1882 aaPredicted RBP15.51■□□□□ 0.07
LIMS1-202ENST00000338045 C2orf81A6NN90 581 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 CCL22O00626 93 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 BUD23O43709 281 aaKnown RBP15.51■□□□□ 0.07
LIMS1-202ENST00000338045 GLRA3O75311 464 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 PIGNO95427 931 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 ARSAP15289 507 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 CD151P48509 253 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 DLG2Q15700 870 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 GAB4Q2WGN9 574 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 MYLK3Q32MK0 819 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 MICALCLQ6ZW33 695 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 PTAR1Q7Z6K3 402 aaPredicted RBP15.51■□□□□ 0.07
LIMS1-202ENST00000338045 CMC1Q7Z7K0 106 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 OR6P1Q8NGX9 317 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 WFIKKN2Q8TEU8 576 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 CDKN2AIPNLQ96HQ2 116 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 CLEC1BQ9P126 229 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 DCDC2Q9UHG0 476 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 SLCO3A1Q9UIG8 710 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 ERVW-1Q9UQF0 538 aa15.51■□□□□ 0.07
LIMS1-202ENST00000338045 CCDC162PA2VCL2 907 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 HAUS5O94927 633 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 GOT2P00505 430 aaKnown RBP15.5■□□□□ 0.07
LIMS1-202ENST00000338045 MPOP05164 745 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 VIMP08670 466 aaKnown RBP15.5■□□□□ 0.07
LIMS1-202ENST00000338045 POLR2EP19388 210 aaKnown RBP15.5■□□□□ 0.07
LIMS1-202ENST00000338045 LPOP22079 712 aaPredicted RBP15.5■□□□□ 0.07
LIMS1-202ENST00000338045 SERPINA4P29622 427 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 GKP32189 559 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 DGKGP49619 791 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 CARD16Q5EG05 197 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 KYAT3Q6YP21 454 aaKnown RBP15.5■□□□□ 0.07
LIMS1-202ENST00000338045 C12orf40Q86WS4 652 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 MFSD6LQ8IWD5 586 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 OR4K2Q8NGD2 314 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 ECHDC3Q96DC8 303 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 MRGPRX3Q96LB0 322 aa15.5■□□□□ 0.07
LIMS1-202ENST00000338045 C19orf43Q9BQ61 176 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms