RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 C4orf33Q8N1A6 199 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 RYBPQ8N488 228 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 ZNF473Q8WTR7 871 aaKnown RBP18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CKAP2Q8WWK9 683 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 VOPP1Q96AW1 172 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 ASB2Q96Q27 587 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 TBL1YQ9BQ87 522 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 FICDQ9BVA6 458 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 VPS45Q9NRW7 570 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 STARD13Q9Y3M8 1113 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 FAM237BA0A1B0GVD1 139 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 WASH3PC4AMC7 463 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 ZWINTO95229 277 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CD72P21854 359 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CES1P23141 567 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 ADRA1AP35348 466 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 IL12RB1P42701 662 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 AP1S1P61966 158 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 SNRPD1P62314 119 aaKnown RBP18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 MLF2Q15773 248 aaPredicted RBP18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 DPY19L3Q6ZPD9 716 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 KDM1BQ8NB78 822 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CHST14Q8NCH0 376 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 OR2A12Q8NGT7 310 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 MGARPQ8TDB4 240 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 TMEM245Q9H330 911 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CACNA2D2Q9NY47 1150 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 CA14Q9ULX7 337 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 RPS6KL1Q9Y6S9 549 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 FAM169AQ9Y6X4 670 aa18.88■□□□□ 0.61
EXOSC3-201ENST00000327304 SPAG7O75391 227 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 KIR2DL1P43626 348 aaPredicted RBP18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 CCNHP51946 323 aaPredicted RBP18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 SLC18A2Q05940 514 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 MGAT5Q09328 741 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 GRSF1Q12849 480 aaKnown RBP eCLIP18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 LRRC14Q15048 493 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 MYLK3Q32MK0 819 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 SERPINA13PQ6UXR4 307 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 PTPRN2Q92932 1015 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 MSANTD3Q96H12 275 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 RABEP2Q9H5N1 569 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 SOX13Q9UN79 622 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 SLC8A2Q9UPR5 921 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 PCDHGC4Q9Y5F7 938 aa18.87■□□□□ 0.61
EXOSC3-201ENST00000327304 TM9SF1O15321 606 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 PIGNO95427 931 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 ASMTLO95671 621 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 HNRNPLP14866 589 aaKnown RBP eCLIP18.86■□□□□ 0.611e-7■■□□□ 14
EXOSC3-201ENST00000327304 DRD1P21728 446 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 CA4P22748 312 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 IL9RQ01113 521 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 TRAF2Q12933 501 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 SLC14A2Q15849 920 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 HNRNPA1L2Q32P51 320 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 RALGPS1Q5JS13 557 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 CERCAMQ5T4B2 595 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 SH2D5Q6ZV89 423 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 ZNF513Q8N8E2 541 aaPredicted RBP18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 BANPQ8N9N5 519 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 FAM3CQ92520 227 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 CERS2Q96G23 380 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 MAGEB18Q96M61 343 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 FSD1LQ9BXM9 530 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 RAI2Q9Y5P3 530 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 TRIOO75962 3097 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 DRD4P21917 467 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 TIE1P35590 1138 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 WASP42768 502 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 CHRNA4P43681 627 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 DNAJC3Q13217 504 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 ANKRD20A4Q4UJ75 823 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 RANBP10Q6VN20 620 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 CAMK1DQ8IU85 385 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 PLPP6Q8IY26 295 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 PTCD2Q8WV60 388 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 KIFC1Q9BW19 673 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 ZDHHC6Q9H6R6 413 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 STON1Q9Y6Q2 735 aa18.86■□□□□ 0.61
EXOSC3-201ENST00000327304 ANKRD36A6QL64 1941 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 EDDM13A0A1B0GTR0 161 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 ZCWPW2A0A1B0GU75 182 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 TRIM49D1C9J1S8 452 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 RPA3P35244 121 aaPredicted RBP18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 MAPK8P45983 427 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 RECQLP46063 649 aaPredicted RBP18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 CCT5P48643 541 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 WDR4P57081 412 aaKnown RBP18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 C2orf27AQ580R0 203 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 DENND5AQ6IQ26 1287 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 TIFABQ6ZNK6 161 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 CPLX4Q7Z7G2 160 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 SLC25A41Q8N5S1 370 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 ZNF669Q96BR6 464 aaPredicted RBP18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 FEM1CQ96JP0 617 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 SERAC1Q96JX3 654 aa18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 FCRL3Q96P31 734 aaPredicted RBP18.85■□□□□ 0.61
EXOSC3-201ENST00000327304 TRIB3Q96RU7 358 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms