RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 BZW1Q7L1Q6 419 aaKnown RBP12.75□□□□□ -0.37
LSM5-201ENST00000223084 PTAR1Q7Z6K3 402 aaPredicted RBP12.75□□□□□ -0.37
LSM5-201ENST00000223084 ABI3BPQ7Z7G0 1075 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 UBL4BQ8N7F7 174 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 DEFB124Q8NES8 71 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 OR13H1Q8NG92 308 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 TFB1MQ8WVM0 346 aaKnown RBP12.75□□□□□ -0.37
LSM5-201ENST00000223084 PIH1D2Q8WWB5 315 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CENPTQ96BT3 561 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CAMK1GQ96NX5 476 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 BRD8Q9H0E9 1235 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 MBNL1Q9NR56 388 aaKnown RBP12.75□□□□□ -0.37
LSM5-201ENST00000223084 TM7SF3Q9NS93 570 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 B4GALT6Q9UBX8 382 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 AMACRQ9UHK6 382 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 PHTF1Q9UMS5 762 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 CHKBQ9Y259 395 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 HS3ST3A1Q9Y663 406 aa12.75□□□□□ -0.37
LSM5-201ENST00000223084 BAHCC1Q9P281 2608 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 MIF4GDA9UHW6 222 aaKnown RBP12.74□□□□□ -0.37
LSM5-201ENST00000223084 H7C0C1 242 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 APOC4-APOC2K7ER74 178 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 FPGTO14772 594 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 NRDCO43847 1150 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 SH3BP5O60239 455 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 LZTS3O60299 673 aaPredicted RBP12.74□□□□□ -0.37
LSM5-201ENST00000223084 FZD6O60353 706 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 PRLP01236 227 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 APOC2P02655 101 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 ALPIP09923 528 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 PTPN3P26045 913 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 PTPN7P35236 360 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 IGFALSP35858 605 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 ATP5OP48047 213 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 SKOR1P84550 965 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 NOMO1Q15155 1222 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 IRF4Q15306 451 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 SHBQ15464 509 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 WSCD2Q2TBF2 565 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 TEX44Q53QW1 395 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 TPRG1LQ5T0D9 272 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 LIPIQ6XZB0 460 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 DPPA4Q7L190 304 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 TP53I13Q8NBR0 393 aaPredicted RBP12.74□□□□□ -0.37
LSM5-201ENST00000223084 ACTL9Q8TC94 416 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 ASB12Q8WXK4 309 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 HES6Q96HZ4 224 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 QKIQ96PU8 341 aaKnown RBP eCLIP12.74□□□□□ -0.37
LSM5-201ENST00000223084 LENG8Q96PV6 779 aaPredicted RBP12.74□□□□□ -0.37
LSM5-201ENST00000223084 ELF4Q99607 663 aaPredicted RBP12.74□□□□□ -0.37
LSM5-201ENST00000223084 TDRD1Q9BXT4 1180 aaKnown RBP12.74□□□□□ -0.37
LSM5-201ENST00000223084 GDF3Q9NR23 364 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 PPP2R2CQ9Y2T4 447 aa12.74□□□□□ -0.37
LSM5-201ENST00000223084 A0A1B0GTQ1 180 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 A0A1W2PQ67 120 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 NPIPB15A6NHN6 443 aaPredicted RBP12.73□□□□□ -0.37
LSM5-201ENST00000223084 A6NNZ2 444 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 F5H423 210 aaPredicted RBP12.73□□□□□ -0.37
LSM5-201ENST00000223084 KCNK5O95279 499 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 ELFN1P0C7U0 828 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 GM2AP17900 193 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 CES1P23141 567 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 VIPR1P32241 457 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 CETN2P41208 172 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 CCT8P50990 548 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 NOVA1P51513 510 aaKnown RBP12.73□□□□□ -0.37
LSM5-201ENST00000223084 OTUD4Q01804 1114 aaKnown RBP12.73□□□□□ -0.37
LSM5-201ENST00000223084 WASHC5Q12768 1159 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 OVGP1Q12889 678 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 BNIP3Q12983 259 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 ZNF542PQ5EBM4 170 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 DENND2CQ68D51 928 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 PSAPL1Q6NUJ1 521 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 KYAT3Q6YP21 454 aaKnown RBP12.73□□□□□ -0.37
LSM5-201ENST00000223084 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 TSPAN33Q86UF1 283 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 GATAD2AQ86YP4 633 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 SLC22A18ASQ8N1D0 253 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 DENND6BQ8NEG7 585 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 LPCAT1Q8NF37 534 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 SPATA22Q8NHS9 363 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.37
LSM5-201ENST00000223084 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 EFR3BQ9Y2G0 817 aa12.73□□□□□ -0.37
LSM5-201ENST00000223084 ARID1BQ8NFD5 2236 aaPredicted RBP12.73□□□□□ -0.37
LSM5-201ENST00000223084 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 DNAH14Q0VDD8 3507 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 TCRBV7S2A1N4TA0A589 114 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 HACD1B0YJ81 288 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 RECQL5O94762 991 aaPredicted RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 TJP3O95049 919 aa12.72□□□□□ -0.37
LSM5-201ENST00000223084 MT-CYBP00156 380 aaPredicted RBP12.72□□□□□ -0.37
LSM5-201ENST00000223084 PCCBP05166 539 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms