RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	PPWD1	Q96BP3	646 aa	Known RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	SGK3	Q96BR1	496 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ASB9	Q96DX5	294 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ERLEC1	Q96DZ1	483 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	DUS3L	Q96G46	650 aa	Known RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	TMEM80	Q96HE8	168 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	KAZALD1	Q96I82	304 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	MAP6	Q96JE9	813 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ZFYVE19	Q96K21	471 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	CLPTM1L	Q96KA5	538 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ARL5B	Q96KC2	179 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	C9orf72	Q96LT7	481 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	UROC1	Q96N76	676 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	RDH12	Q96NR8	316 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	OPALIN	Q96PE5	141 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	FAM111A	Q96PZ2	611 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	BBS4	Q96RK4	519 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	MNT	Q99583	582 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	AGPAT1	Q99943	283 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	SPOCK3	Q9BQ16	436 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	TMEM246	Q9BRR3	403 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	DHRS4	Q9BTZ2	278 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	MYL10	Q9BUA6	226 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	TRIT1	Q9H3H1	467 aa	Known RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	MUC13	Q9H3R2	512 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	C8orf33	Q9H7E9	229 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ACAD9	Q9H845	621 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	LIN28A	Q9H9Z2	209 aa	Known RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF556	Q9HAH1	456 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	CYP4F11	Q9HBI6	524 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	PCDH9	Q9HC56	1237 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	C6orf50	Q9HD87	102 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	OSGEP	Q9NPF4	335 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	WASH6P	Q9NQA3	447 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	TMEM39A	Q9NV64	488 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	SIRPG	Q9P1W8	387 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ZSWIM5	Q9P217	1185 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	PI4KB	Q9UBF8	816 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	NXF1	Q9UBU9	619 aa	Known RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	CPSF3	Q9UKF6	684 aa	Known RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	CDC14A	Q9UNH5	594 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	TLR6	Q9Y2C9	796 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	PPP2R3B	Q9Y5P8	575 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	ICE1	Q9Y2F5	2266 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	SDK1	Q7Z5N4	2213 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	COL11A1	P12107	1806 aa	Predicted RBP	4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	DOCK2	Q92608	1830 aa		4.05	□□□□□ -1.76
CHD2-225	ENST00000636861	CELSR2	Q9HCU4	2923 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861		A0A0B4J203	849 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	FAM237B	A0A1B0GVD1	139 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	TYW5	A2RUC4	315 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	RGSL1	A5PLK6	1076 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	USP17L3	A6NCW0	530 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	USP17L4	A6NCW7	530 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	EFCAB10	A6NFE3	127 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	TUBAL3	A6NHL2	446 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	OR5K4	A6NMS3	321 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SFI1	A8K8P3	1242 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	ZBBX	A8MT70	800 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	C12orf71	A8MTZ7	269 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	KPNA7	A9QM74	516 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	LOC730098	B7Z3J9	87 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	ANKRD63	C9JTQ0	380 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	PRSS44	E7EML9	344 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	ATP6V1G2-DDX39B	F2Z307	99 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	LOC110117498-PIK3R3	F6TDL0	507 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861		H0YAE9	185 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	NOP56	O00567	594 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	TRDMT1	O14717	391 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	TFEC	O14948	347 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	AURKA	O14965	403 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	TRIM24	O15164	1050 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	PAPSS1	O43252	624 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	MBTPS2	O43462	519 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	PI15	O43692	258 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	GATC	O43716	136 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	NDUFS2	O75306	463 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	GLRA3	O75311	464 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SNN	O75324	88 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	KATNA1	O75449	491 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SNAPC5	O75971	98 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SEC14L2	O76054	403 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	PDE9A	O76083	593 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	PRKD3	O94806	890 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SLITRK5	O94991	958 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SNX4	O95219	450 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SEC24A	O95486	1093 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	NDST3	O95803	873 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	OLFM2	O95897	454 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	PCCA	P05165	728 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	JUN	P05412	331 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	CALB1	P05937	261 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	SNRPA	P09012	282 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	CYP2D6	P10635	497 aa		4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	MTHFD1	P11586	935 aa	Known RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF182	P17025	639 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF26	P17031	533 aa	Predicted RBP	4.04	□□□□□ -1.76
CHD2-225	ENST00000636861	ZNF3	P17036	446 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms