RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TRMT11Q7Z4G4 463 aaKnown RBP17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 PALM2Q8IXS6 379 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 IL17RCQ8NAC3 791 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 CFAP36Q96G28 342 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 OSBPL1AQ9BXW6 950 aa17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 RPL26L1Q9UNX3 145 aaKnown RBP17.93■□□□□ 0.46
PTCHD3-202ENST00000622555 ANKRD66B4E2M5 251 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 SYNCRIPO60506 623 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 RNF40O75150 1001 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 ACSL3O95573 720 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 TTC4O95801 387 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 PIRTP0C851 137 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 SLC8A1P32418 973 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 HSD17B3P37058 310 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 GRIA4P48058 902 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 MRPS21P82921 87 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 CCINQ13939 588 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 QPCTQ16769 361 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 UBAP2Q5T6F2 1119 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 DSG4Q86SJ6 1040 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 PPHLN1Q8NEY8 458 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 BLOC1S5Q8TDH9 187 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 PIH1D2Q8WWB5 315 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 ECHDC3Q96DC8 303 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 TTC25Q96NG3 672 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 FAM129BQ96TA1 746 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 PABPC3Q9H361 631 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 PRKCGP05129 697 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 UAP1Q16222 522 aaPredicted RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 POM121L1PQ3SYA9 428 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 PCID2Q5JVF3 399 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 ZSWIM9Q86XI8 627 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 UBALD2Q8IYN6 164 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 TXNDC5Q8NBS9 432 aaKnown RBP17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 TMIEQ8NEW7 156 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 SHDQ96IW2 340 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 SMIM14Q96QK8 99 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 GABRG3Q99928 467 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 NAT9Q9BTE0 207 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 VPS37BQ9H9H4 285 aa17.92■□□□□ 0.46
PTCHD3-202ENST00000622555 A0A1W2PQ67 120 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 KRBA1A5PL33 1030 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 H3BQF6 201 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 KPNA3O00505 521 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 RIPK2O43353 540 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 CTPS1P17812 591 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 PGAM1P18669 254 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 FAM193AP78312 1265 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 MSLNQ13421 630 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 CAMK2GQ13555 558 aaPredicted RBP17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 STARD3Q14849 445 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 ZNF805Q5CZA5 627 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 BRAT1Q6PJG6 821 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 CCNJLQ8IV13 435 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 GJD3Q8N144 294 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 RPLP0P6Q8NHW5 317 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 PIP4K2CQ8TBX8 421 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 TRIM56Q9BRZ2 755 aaKnown RBP17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 LRRC4CQ9HCJ2 640 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 CHRAC1Q9NRG0 131 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 SARDHQ9UL12 918 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 PPM1HQ9ULR3 514 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 PHTF1Q9UMS5 762 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 SOX13Q9UN79 622 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 MRPS17Q9Y2R5 130 aaKnown RBP17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 TCAF1Q9Y4C2 921 aa17.91■□□□□ 0.46
PTCHD3-202ENST00000622555 MAGEB16A2A368 324 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 CCDC78A2IDD5 438 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 HEATR9A2RTY3 570 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 ADAM23O75077 832 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 IL1BP01584 269 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 ADRA1DP25100 572 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 OAS2P29728 719 aaKnown RBP17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 SSTR1P30872 391 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 ABL2P42684 1182 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 SPDYCQ5MJ68 293 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 UNC5AQ6ZN44 842 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 MMAAQ8IVH4 418 aaKnown RBP17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 SIX5Q8N196 739 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 UHMK1Q8TAS1 419 aaKnown RBP17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 EPB41L4BQ9H329 900 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 MUTYHQ9UIF7 546 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 SPO11Q9Y5K1 396 aa17.9■□□□□ 0.46
PTCHD3-202ENST00000622555 A0A0J9YYE9 177 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 FAM237BA0A1B0GVD1 139 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 C1QTNF3-AMACRE9PGA6 284 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 TRBC1P01850 177 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 ALPIP09923 528 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 HOXB2P14652 356 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 PSMD8P48556 350 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 GPX6P59796 221 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 POLR2LP62875 67 aaKnown RBP17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 GPS2Q13227 327 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 SLC29A2Q14542 456 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 PTPRRQ15256 657 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 PKN3Q6P5Z2 889 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 CES3Q6UWW8 571 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 C3orf62Q6ZUJ4 267 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 NDUFAF2Q8N183 169 aa17.89■□□□□ 0.46
PTCHD3-202ENST00000622555 BRSK1Q8TDC3 778 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms