RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 DOCK3Q8IZD9 2030 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 E9PAM4 449 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 VILLO15195 856 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 FGF10O15520 208 aaPredicted RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 LTA4HP09960 611 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 CYP2C18P33260 490 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 GRIK1P39086 918 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 KCNC1P48547 511 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 SLC5A3P53794 718 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 STX5Q13190 355 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 LRP8Q14114 963 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 FSCN1Q16658 493 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 MGAT5BQ3V5L5 792 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 NADK2Q4G0N4 442 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 ARTNQ5T4W7 220 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 KLC3Q6P597 504 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 CHSY3Q70JA7 882 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 LZTR1Q8N653 840 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 SH3RF2Q8TEC5 729 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 LRTOMTQ8WZ04 291 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 LPGAT1Q92604 370 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 KLHL5Q96PQ7 755 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 SLC39A3Q9BRY0 314 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 ALG9Q9H6U8 611 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 MEAF6Q9HAF1 191 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 EML4Q9HC35 981 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 MRM3Q9HC36 420 aaKnown RBP11.87□□□□□ -0.51
C11orf54-215ENST00000617482 HS3ST4Q9Y661 456 aa11.87□□□□□ -0.51
C11orf54-215ENST00000617482 MYADML2A6NDP7 307 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PRORSD1PA6NEY8 169 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 OR51F1A6NGY5 319 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 J3KR12 359 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 UBFD1O14562 309 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 TNFAIP8O95379 198 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CD86P42081 329 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PFKPQ01813 784 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CACNB2Q08289 660 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 MAP2K5Q13163 448 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 BRMS1LQ5PSV4 323 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 GPR158Q5T848 1215 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 HECTD2Q5U5R9 776 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 MANEALQ5VSG8 457 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 TIGD7Q6NT04 549 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 STON2Q8WXE9 905 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 MPP4Q96JB8 637 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 COQ10BQ9H8M1 238 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 FBRSL1Q9HCM7 1045 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 ABCC13Q9NSE7 274 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 UTP6Q9NYH9 597 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 SNX13Q9Y5W8 968 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 A0A1B0GTW7 788 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 SUPT7LO94864 414 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CHRNA1P02708 482 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 ITGB1P05556 798 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 FAM58BPP0C7Q3 252 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CDKN2DP55273 166 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 NME5P56597 212 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 SQLEQ14534 574 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PITRM1Q5JRX3 1037 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 TMEM207Q6UWW9 146 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 AMIGO2Q86SJ2 522 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 SCD5Q86SK9 330 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PIM3Q86V86 326 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 ZNF354CQ86Y25 554 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CCDC117Q8IWD4 279 aaPredicted RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 RTL3Q8N8U3 475 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 EXT2Q93063 718 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PABPC5Q96DU9 382 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 PRKD2Q9BZL6 878 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 AGO3Q9H9G7 860 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 NMUR1Q9HB89 426 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
C11orf54-215ENST00000617482 CRYL1Q9Y2S2 319 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 VWA7Q9Y334 891 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 TRAF6Q9Y4K3 522 aa11.86□□□□□ -0.51
C11orf54-215ENST00000617482 HEATR9A2RTY3 570 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 C7orf72A4D263 438 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 SLC4A1P02730 911 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 SNRPB2P08579 225 aaKnown RBP11.85□□□□□ -0.51
C11orf54-215ENST00000617482 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 NELFEP18615 380 aaKnown RBP11.85□□□□□ -0.51
C11orf54-215ENST00000617482 HOXC13P31276 330 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 LEPRP48357 1165 aaKnown RBP11.85□□□□□ -0.51
C11orf54-215ENST00000617482 SERPINH1P50454 418 aaKnown RBP11.85□□□□□ -0.51
C11orf54-215ENST00000617482 ARSDP51689 593 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 CDH13P55290 713 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 SLC10A7Q0GE19 358 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 IHHQ14623 411 aa11.85□□□□□ -0.51
C11orf54-215ENST00000617482 CYTH1Q15438 398 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms