RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ZNRF3Q9ULT6 936 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 TESMINQ9Y4I5 508 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 GMPPBQ9Y5P6 360 aa13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 COPG1Q9Y678 874 aaKnown RBP13.63□□□□□ -0.23
PPP4R3B-205ENST00000616288 PIPSLA2A3N6 862 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 RFPL1O75677 317 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CD36P16671 472 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 PAMP19021 973 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 SLC15A1P46059 708 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 MPP1Q00013 466 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 PUDPQ08623 228 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 DPY19L3Q6ZPD9 716 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 TICAM1Q8IUC6 712 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CENPLQ8N0S6 344 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 LSM14AQ8ND56 463 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 SNAPC3Q92966 411 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 TIMM22Q9Y584 194 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 G3V2T6 193 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 PDPK1O15530 556 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 MTRF1O75570 445 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 IFNA16P05015 189 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 ALDH2P05091 517 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 EPHX2P34913 555 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 SRP54P61011 504 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 KLF1Q13351 362 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 RBBP7Q16576 425 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 ARHGEF16Q5VV41 709 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 SLFN12LQ6IEE8 588 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 C16orf86Q6ZW13 317 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 AHSA2Q719I0 299 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 UTP15Q8TED0 518 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 FSD1LQ9BXM9 530 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CPNE5Q9HCH3 593 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CHRAC1Q9NRG0 131 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 RIC8BQ9NVN3 520 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 BAIAP2Q9UQB8 552 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 B3GNT3Q9Y2A9 372 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 TNS3Q68CZ2 1445 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 PLOD3O60568 738 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 FGF3P11487 239 aaPredicted RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CCR10P46092 362 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 MRPS5P82675 430 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 FPGSQ05932 587 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 NFIL3Q16649 462 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 GARNL3Q5VVW2 1013 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 FAM91A1Q658Y4 838 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 RASSF6Q6ZTQ3 369 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 LINC00523Q86TU6 105 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CERS2Q96G23 380 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 AS3MTQ9HBK9 375 aa13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 CPSF3Q9UKF6 684 aaKnown RBP13.62□□□□□ -0.23
PPP4R3B-205ENST00000616288 M0R2N6 131 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 CSF2P04141 144 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 S100A9P06702 114 aaKnown RBP13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 CCNYL3P0C7X3 344 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 PGAM1P18669 254 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 RRM2P31350 389 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 ALDH7A1P49419 539 aaKnown RBP13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 ZNF597Q96LX8 424 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 TMEM233B4DJY2 109 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 TP73O15350 636 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 ARHGEF15O94989 841 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 DHRS4L1P0CG22 281 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 FMO3P31513 532 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 IDUAP35475 653 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 PLA2G16P53816 162 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 MTMR1Q13613 665 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 BTBD16Q32M84 506 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 BOLA3Q53S33 107 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 PPP4R4Q6NUP7 873 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 PODNQ7Z5L7 613 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 KCNMB4Q86W47 210 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 LGI2Q8N0V4 545 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 NUPL2O15504 423 aaKnown RBP13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 MBL2P11226 248 aaPredicted RBP13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 GLDCP23378 1020 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 HNF4AP41235 474 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 HLCSP50747 726 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 EPS8Q12929 822 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 SELENBP1Q13228 472 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 OXA1LQ15070 435 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 BCL2A1Q16548 175 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 PYDC2Q56P42 97 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 EPGNQ6UW88 154 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 RIC1Q4ADV7 1423 aa13.61□□□□□ -0.23
PPP4R3B-205ENST00000616288 A0A0J9YYE9 177 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 DYNC1LI2O43237 492 aaPredicted RBP13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 MTHFRP42898 656 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 RAB25P57735 213 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 PTP4A2Q12974 167 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 SPCS2Q15005 226 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 PLA2G4EQ3MJ16 856 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 STYK1Q6J9G0 422 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
PPP4R3B-205ENST00000616288 ADAMTS16Q8TE57 1224 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms