RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 PAF1Q8N7H5 531 aa23.21■■□□□ 1.31
SNX5-217ENST00000606557 CEP76Q8TAP6 659 aa23.21■■□□□ 1.31
SNX5-217ENST00000606557 SLC35B2Q8TB61 432 aa23.21■■□□□ 1.31
SNX5-217ENST00000606557 TCEAL3Q969E4 200 aa23.21■■□□□ 1.31
SNX5-217ENST00000606557 FEM1CQ96JP0 617 aa23.21■■□□□ 1.31
SNX5-217ENST00000606557 TDRD1Q9BXT4 1180 aaKnown RBP23.21■■□□□ 1.31
SNX5-217ENST00000606557 A0A1B0GTW7 788 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 BCAT2O15382 392 aaPredicted RBP23.2■■□□□ 1.3
SNX5-217ENST00000606557 ATP1A1P05023 1023 aaKnown RBP23.2■■□□□ 1.3
SNX5-217ENST00000606557 PRKCGP05129 697 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 MSNP26038 577 aaKnown RBP23.2■■□□□ 1.3
SNX5-217ENST00000606557 CXCR5P32302 372 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 SF3A2Q15428 464 aaKnown RBP23.2■■□□□ 1.3
SNX5-217ENST00000606557 TMEM52BQ4KMG9 183 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 TRIM61Q5EBN2 209 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 ERAP2Q6P179 960 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 SLC23A3Q6PIS1 610 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 ADAT2Q7Z6V5 191 aaKnown RBP23.2■■□□□ 1.3
SNX5-217ENST00000606557 KLK6Q92876 244 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 TADA1Q96BN2 335 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 USP29Q9HBJ7 922 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 TM9SF3Q9HD45 589 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 KLHL8Q9P2G9 620 aaPredicted RBP23.2■■□□□ 1.3
SNX5-217ENST00000606557 PHTF1Q9UMS5 762 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 DMTF1Q9Y222 760 aa23.2■■□□□ 1.3
SNX5-217ENST00000606557 PTPRZ1P23471 2315 aaPredicted RBP23.19■■□□□ 1.3
SNX5-217ENST00000606557 KCNN4O15554 427 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 ZNF189O75820 626 aaPredicted RBP23.19■■□□□ 1.3
SNX5-217ENST00000606557 PDHA1P08559 390 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 PRLRP16471 622 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 NFKB1P19838 968 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 CA4P22748 312 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 SLC14A2Q15849 920 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 PRR23CQ6ZRP0 262 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 GPR161Q8N6U8 529 aaKnown RBP23.19■■□□□ 1.3
SNX5-217ENST00000606557 PIH1D2Q8WWB5 315 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 ATG4AQ8WYN0 398 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 SLC6A18Q96N87 628 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 RBM15Q96T37 977 aaKnown RBP eCLIP23.19■■□□□ 1.3
SNX5-217ENST00000606557 FERMT1Q9BQL6 677 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 CAPN10Q9HC96 672 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 KCND1Q9NSA2 647 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 TRHDEQ9UKU6 1024 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 DNPEPQ9ULA0 475 aa23.19■■□□□ 1.3
SNX5-217ENST00000606557 IGLON5A6NGN9 336 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 PRR5-ARHGAP8B1AHC4 643 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 KHNYNO15037 678 aaKnown RBP23.18■■□□□ 1.3
SNX5-217ENST00000606557 CEP104O60308 925 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 PRLP01236 227 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 FGGP02679 453 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 CFIP05156 583 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 RACK1P63244 317 aaKnown RBP23.18■■□□□ 1.3
SNX5-217ENST00000606557 SEMG2Q02383 582 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 RALGDSQ12967 914 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 FGL2Q14314 439 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 SIX1Q15475 284 aaPredicted RBP23.18■■□□□ 1.3
SNX5-217ENST00000606557 NAPEPLDQ6IQ20 393 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 DPPA4Q7L190 304 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 PID1Q7Z2X4 250 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 CXorf40AQ8TE69 158 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 SERAC1Q96JX3 654 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 WRAP53Q9BUR4 548 aaKnown RBP23.18■■□□□ 1.3
SNX5-217ENST00000606557 C1QTNF2Q9BXJ5 285 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 SLC17A9Q9BYT1 436 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 FRMD8P1Q9BZ68 369 aaPredicted RBP23.18■■□□□ 1.3
SNX5-217ENST00000606557 PCDH9Q9HC56 1237 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 SLC6A14Q9UN76 642 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 CHKBQ9Y259 395 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 PPIL1Q9Y3C6 166 aa23.18■■□□□ 1.3
SNX5-217ENST00000606557 WNT9AO14904 365 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 SLC31A1O15431 190 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 MMP20O60882 483 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 AFF3P51826 1226 aaKnown RBP23.17■■□□□ 1.3
SNX5-217ENST00000606557 FAM193AP78312 1265 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 IRX4P78413 519 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 SPATA22Q8NHS9 363 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 MCCC1Q96RQ3 725 aaPredicted RBP23.17■■□□□ 1.3
SNX5-217ENST00000606557 NUSAP1Q9BXS6 441 aaKnown RBP23.17■■□□□ 1.3
SNX5-217ENST00000606557 B4GALT6Q9UBX8 382 aa23.17■■□□□ 1.3
SNX5-217ENST00000606557 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.17■■□□□ 1.3
SNX5-217ENST00000606557 LNP1A1A4G5 178 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 PRAMEF26H0Y7S4 382 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 LIASO43766 372 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 FOXD2O60548 495 aaPredicted RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 STK10O94804 968 aaKnown RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 MT-CYBP00156 380 aaPredicted RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 HOXD11P31277 338 aaPredicted RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 GRIA4P48058 902 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 RPL26P61254 145 aaKnown RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 OASLQ15646 514 aaKnown RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 ANKRD20A2Q5SQ80 823 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 ANKRD20A1Q5TYW2 823 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 ANKRD20A3Q5VUR7 823 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 KIAA2013Q8IYS2 634 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 RASGEF1CQ8N431 466 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 C12orf50Q8NA57 414 aaPredicted RBP23.16■■□□□ 1.3
SNX5-217ENST00000606557 TMEM145Q8NBT3 493 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 C1orf54Q8WWF1 131 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 ASB12Q8WXK4 309 aa23.16■■□□□ 1.3
SNX5-217ENST00000606557 PBKQ96KB5 322 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms