RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 WWP1Q9H0M0 922 aa15.51■□□□□ 0.07
PNKP-204ENST00000594661 ARMC7Q9H6L4 198 aa15.51■□□□□ 0.07
PNKP-204ENST00000594661 WBP1LQ9NX94 342 aa15.51■□□□□ 0.07
PNKP-204ENST00000594661 MYOCOSA0A1B0GUC4 107 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ARHGAP42A6NI28 874 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 TRIM49D1C9J1S8 452 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 KCNK1O00180 336 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ADAM12O43184 909 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 INHBBP09529 407 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 AOC1P19801 751 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CCR1P32246 355 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ETV4P43268 484 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 HSPA13P48723 471 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ZNF135P52742 658 aaPredicted RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 MGAT5BQ3V5L5 792 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 RABGAP1LQ5R372 815 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ARTNQ5T4W7 220 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 C1orf53Q5VUE5 145 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 PDZD4Q76G19 769 aaPredicted RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 ZNF567Q8N184 647 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 PQLC1Q8N2U9 271 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 GSDMBQ8TAX9 411 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 PTCD2Q8WV60 388 aaKnown RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 APOPT1Q96IL0 206 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 VN1R3Q9BXE9 311 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CWH43Q9H720 699 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 SMYD2Q9NRG4 433 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 QPCTLQ9NXS2 382 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 IL37Q9NZH6 218 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 GNPTGQ9UJJ9 305 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 PSMD13Q9UNM6 376 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 SORCS3Q9UPU3 1222 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CARD8Q9Y2G2 431 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CDY1Q9Y6F8 540 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 H7C4K7 107 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 AQP9O43315 295 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 KRT37O76014 449 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ESRRBO95718 433 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 MOCS2O96007 188 aaPredicted RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 SERPINB6P35237 376 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 C21orf59P57076 290 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 IKBKEQ14164 716 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 GK3PQ14409 553 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CYTH1Q15438 398 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 PHKG1Q16816 387 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CNKSR3Q6P9H4 555 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ISLR2Q6UXK2 745 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 ANKS3Q6ZW76 656 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 TMCO2Q7Z6W1 182 aaPredicted RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 TSPAN14Q8NG11 270 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 CELF6Q96J87 481 aaKnown RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 CTRCQ99895 268 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 MAN1C1Q9NR34 630 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 VPS45Q9NRW7 570 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 TMEM39AQ9NV64 488 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 RAD54BQ9Y620 910 aa15.5■□□□□ 0.07
PNKP-204ENST00000594661 MRPL42Q9Y6G3 142 aaKnown RBP15.5■□□□□ 0.07
PNKP-204ENST00000594661 FAM92AA1XBS5 289 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 TMEM114B3SHH9 223 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 ZBTB11O95625 1053 aaPredicted RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 EFEMP2O95967 443 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 C8BP07358 591 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 SNRPAP09012 282 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 RPL17P18621 184 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 YWHAQP27348 245 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PSMB4P28070 264 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 GSSP48637 474 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 ALDH7A1P49419 539 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 SLC18A2Q05940 514 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 GALNT2Q10471 571 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 DUSP4Q13115 394 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 LGSNQ5TDP6 509 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 NANOGP8Q6NSW7 305 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 MSANTD2Q6P1R3 559 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 CASC4Q6P4E1 433 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 TRMT10BQ6PF06 316 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 ACTRT2Q8TDY3 377 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 FBXO32Q969P5 355 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 TMIGD2Q96BF3 282 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 FCRL2Q96LA5 508 aaPredicted RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 SERPINB11Q96P15 392 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PAIP1Q9H074 479 aaKnown RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 NCKIPSDQ9NZQ3 722 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 POMPQ9Y244 141 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 KCNU1A8MYU2 1149 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PRR5-ARHGAP8B1AHC4 643 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PFDN6O15212 129 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 UGT1A9O60656 530 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 SERPINA6P08185 405 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 HAPLN1P10915 354 aaPredicted RBP15.49■□□□□ 0.07
PNKP-204ENST00000594661 BGNP21810 368 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PTPN3P26045 913 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 ARHGAP8P85298 464 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 MANEALQ5VSG8 457 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 SH2D5Q6ZV89 423 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 PCYOX1LQ8NBM8 494 aa15.49■□□□□ 0.07
PNKP-204ENST00000594661 LSM14AQ8ND56 463 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms