RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TRIM72Q6ZMU5 477 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 MON1BQ7L1V2 547 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 HID1Q8IV36 788 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 UMODL1-AS1Q8N2C9 162 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 SDR16C5Q8N3Y7 309 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 C3orf20Q8ND61 904 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 GPR156Q8NFN8 814 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 HCAR2Q8TDS4 363 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 CCNL2Q96S94 520 aaPredicted RBP18.58■□□□□ 0.56
CCDC43-204ENST00000588687 RBM15Q96T37 977 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCDC43-204ENST00000588687 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 SYNDIG1Q9H7V2 258 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 OR1A2Q9Y585 309 aa18.58■□□□□ 0.56
CCDC43-204ENST00000588687 UNC13CQ8NB66 2214 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 PES1O00541 588 aaKnown RBP18.57■□□□□ 0.56
CCDC43-204ENST00000588687 CCP110O43303 1012 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 RASGRP1O95267 797 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 RPLP0P05388 317 aaKnown RBP18.57■□□□□ 0.56
CCDC43-204ENST00000588687 ALPIP09923 528 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 KRT3P12035 628 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 HGFP14210 728 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 GPD1P21695 349 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 SLC5A2P31639 672 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 CCL7P80098 99 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 RAD51Q06609 339 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 ELP6Q0PNE2 266 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 INPP5AQ14642 412 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 ZSCAN23Q3MJ62 389 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 CDKAL1Q5VV42 579 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 RAB11FIP2Q7L804 512 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 SLFN11Q7Z7L1 901 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 PHF13Q86YI8 300 aaPredicted RBP18.57■□□□□ 0.56
CCDC43-204ENST00000588687 SFTPA2Q8IWL1 248 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 EXD3Q8N9H8 876 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 FUBP1Q96AE4 644 aaKnown RBP18.57■□□□□ 0.56
CCDC43-204ENST00000588687 GFM1Q96RP9 751 aaKnown RBP18.57■□□□□ 0.56
CCDC43-204ENST00000588687 APOOQ9BUR5 198 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 LRRC19Q9H756 370 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 EPB41L5Q9HCM4 733 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 GULP1Q9UBP9 304 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 DGKBQ9Y6T7 804 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 RELNP78509 3460 aa18.57■□□□□ 0.56
CCDC43-204ENST00000588687 FLNCQ14315 2725 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 TMEM110-MUSTN1A8MSY1 372 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 BUB1BO60566 1050 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-204ENST00000588687 RGRP47804 291 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 LIG3P49916 1009 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 INHBCP55103 352 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 SRP54P61011 504 aaKnown RBP18.56■□□□□ 0.56
CCDC43-204ENST00000588687 POLR2FP61218 127 aaKnown RBP18.56■□□□□ 0.56
CCDC43-204ENST00000588687 RALGDSQ12967 914 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 TGIF1Q15583 401 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 CLEC16AQ2KHT3 1053 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 LINC00303Q3SY05 128 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 PPP1R15BQ5SWA1 713 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 DNAAF5Q86Y56 855 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 FBXO39Q8N4B4 442 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 PLA2G15Q8NCC3 412 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 FGF22Q9HCT0 170 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-204ENST00000588687 KLQ9UEF7 1012 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 APPL1Q9UKG1 709 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 FZD10Q9ULW2 581 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 GPR34Q9UPC5 381 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
CCDC43-204ENST00000588687 ARHGEF17Q96PE2 2063 aaPredicted RBP18.56■□□□□ 0.56
CCDC43-204ENST00000588687 PRKCGP05129 697 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 GM2AP17900 193 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 ZNF143P52747 638 aaPredicted RBP18.55■□□□□ 0.56
CCDC43-204ENST00000588687 ZFP36L1Q07352 338 aaKnown RBP18.55■□□□□ 0.56
CCDC43-204ENST00000588687 MTM1Q13496 603 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 EFHC2Q5JST6 749 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 CERCAMQ5T4B2 595 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 ENPP7Q6UWV6 458 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 TMPRSS9Q7Z410 1059 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 GKN2Q86XP6 184 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 ZNF354CQ86Y25 554 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 OR1E3Q8WZA6 343 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 WDR92Q96MX6 357 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 LRRN3Q9H3W5 708 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 SUV39H2Q9H5I1 410 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 NLRC4Q9NPP4 1024 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 ADAM22Q9P0K1 906 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 DOLKQ9UPQ8 538 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 ATP8A1Q9Y2Q0 1164 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 DAAM1Q9Y4D1 1078 aa18.55■□□□□ 0.56
CCDC43-204ENST00000588687 TMEM202A6NGA9 273 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 SIGLEC16A6NMB1 481 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 J3KR12 359 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 PRAMEF11O60813 436 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 PCCBP05166 539 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 HTR1BP28222 390 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 NSFP46459 744 aaKnown RBP18.54■□□□□ 0.56
CCDC43-204ENST00000588687 KIAA1024LP59773 190 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 RPL7AP62424 266 aaKnown RBP18.54■□□□□ 0.56
CCDC43-204ENST00000588687 KRT31Q15323 416 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 BRAT1Q6PJG6 821 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 OGFOD3Q6PK18 319 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 CAMK1DQ8IU85 385 aa18.54■□□□□ 0.56
CCDC43-204ENST00000588687 CCNJLQ8IV13 435 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms