RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 INPP5AQ14642 412 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 NCAPHQ15003 741 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 IGFBP7Q16270 282 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 MAP9Q49MG5 647 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 ATXN7L2Q5T6C5 722 aaPredicted RBP12.58□□□□□ -0.4
SNX29-207ENST00000568949 TMPRSS9Q7Z410 1059 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 PIM3Q86V86 326 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 FAM46DQ8NEK8 389 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 HCAR2Q8TDS4 363 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 CASKIN2Q8WXE0 1202 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 C18orf8Q96DM3 657 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 TIGD1Q96MW7 591 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 TAAR9Q96RI9 348 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 TTYH3Q9C0H2 523 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 TMEM248Q9NWD8 314 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 APEX2Q9UBZ4 518 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 OR1A2Q9Y585 309 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
SNX29-207ENST00000568949 PPP1R3GB7ZBB8 358 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 IGSF6O95976 241 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 CCL4P13236 92 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 RHOQP17081 205 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 XPAP23025 273 aaPredicted RBP12.57□□□□□ -0.4
SNX29-207ENST00000568949 CDH5P33151 784 aaPredicted RBP12.57□□□□□ -0.4
SNX29-207ENST00000568949 FLT3P36888 993 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 MTM1Q13496 603 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 BECN1Q14457 450 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 C4orf17Q53FE4 359 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 FAM102AQ5T9C2 384 aaPredicted RBP12.57□□□□□ -0.4
SNX29-207ENST00000568949 MANEALQ5VSG8 457 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 ISM2Q6H9L7 571 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 NYAP1Q6ZVC0 841 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 ARCQ7LC44 396 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 NLRP14Q86W24 1093 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 FAM131BQ86XD5 332 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 IRF2BP1Q8IU81 584 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 TMEM35BQ8NCS4 154 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 JPH3Q8WXH2 748 aaPredicted RBP12.57□□□□□ -0.4
SNX29-207ENST00000568949 PDXPQ96GD0 296 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 NDFIP2Q9NV92 336 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 MAN1B1Q9UKM7 699 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 COQ6Q9Y2Z9 468 aa12.57□□□□□ -0.4
SNX29-207ENST00000568949 ZNF891A8MT65 544 aaPredicted RBP12.56□□□□□ -0.4
SNX29-207ENST00000568949 TNFRSF10CO14798 259 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 CAPN5O15484 640 aaPredicted RBP12.56□□□□□ -0.4
SNX29-207ENST00000568949 ZW10O43264 779 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 B4GAT1O43505 415 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 KDELR3O43731 214 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 RAMP2O60895 175 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 TMCC1O94876 653 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
SNX29-207ENST00000568949 LIFP15018 202 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 SLC9A1P19634 815 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 ARSDP51689 593 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 KIAA1024LP59773 190 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 INO80DQ53TQ3 878 aaPredicted RBP12.56□□□□□ -0.4
SNX29-207ENST00000568949 KCTD16Q68DU8 428 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 SPECC1LQ69YQ0 1117 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 TRNP1Q6NT89 227 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 RWDD4Q6NW29 188 aaKnown RBP12.56□□□□□ -0.4
SNX29-207ENST00000568949 GBP6Q6ZN66 633 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 ZNF438Q7Z4V0 828 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 SLC47A2Q86VL8 602 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 XYLT1Q86Y38 959 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 ELOA2Q8IYF1 753 aaPredicted RBP12.56□□□□□ -0.4
SNX29-207ENST00000568949 IL22RA1Q8N6P7 574 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 OR56A4Q8NGH8 313 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 OR1E3Q8WZA6 343 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 HMCESQ96FZ2 354 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 DPEP2Q9H4A9 486 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 GDPD2Q9HCC8 539 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 PLCB1Q9NQ66 1216 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 OR12D3Q9UGF7 316 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 DNAI1Q9UI46 699 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 TMEM59LQ9UK28 342 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 CTNND2Q9UQB3 1225 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 CREBBPQ92793 2442 aa12.56□□□□□ -0.4
SNX29-207ENST00000568949 ANKRD36A6QL64 1941 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 TSPAN11A1L157 253 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 GTPBP10A4D1E9 387 aaKnown RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 CFAP69A5D8W1 941 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 B4DGG1 531 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 CACNB4O00305 520 aaPredicted RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 FOXN3O00409 490 aaPredicted RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 BUB1O43683 1085 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 PCCBP05166 539 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 HOXC4P09017 264 aaPredicted RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 FGF3P11487 239 aaPredicted RBP12.55□□□□□ -0.4
SNX29-207ENST00000568949 BMP6P22004 513 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 KELP23276 732 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 ADRA1BP35368 520 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 UGT1A3P35503 534 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 CLCN1P35523 988 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 BPIFB4P59827 614 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 RHOAP61586 193 aa12.55□□□□□ -0.4
SNX29-207ENST00000568949 TRA2AQ13595 282 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms