RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 DLL3Q9NYJ7 618 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 SEPT10Q9P0V9 454 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 SLC6A14Q9UN76 642 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 DMTF1Q9Y222 760 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 JRKLQ9Y4A0 524 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 PCDHB9Q9Y5E1 797 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.95■□□□□ 0.3
RPL28-209ENST00000560055 DOCK9Q9BZ29 2069 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 PCDH15Q96QU1 1955 aa16.95■□□□□ 0.3
RPL28-209ENST00000560055 NCOR2Q9Y618 2525 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 GOLGA6L9A6NEM1 432 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 PRR5-ARHGAP8B1AHC4 643 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 H7C0C1 242 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 NEMP1O14524 444 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 WNT9AO14904 365 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 RBP3P10745 1247 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 RBL1P28749 1068 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 CD68P34810 354 aaPredicted RBP16.94■□□□□ 0.3
RPL28-209ENST00000560055 ATP5OP48047 213 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 GRIA4P48058 902 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 AFF3P51826 1226 aaKnown RBP16.94■□□□□ 0.3
RPL28-209ENST00000560055 SKOR1P84550 965 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 SLC14A2Q15849 920 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 ARMC12Q5T9G4 340 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 NAPEPLDQ6IQ20 393 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 ERMP1Q7Z2K6 904 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 SLC13A5Q86YT5 568 aaPredicted RBP16.94■□□□□ 0.3
RPL28-209ENST00000560055 CDKL3Q8IVW4 592 aaPredicted RBP16.94■□□□□ 0.3
RPL28-209ENST00000560055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.94■□□□□ 0.3
RPL28-209ENST00000560055 TMEM145Q8NBT3 493 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 SLC35B2Q8TB61 432 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 PIH1D2Q8WWB5 315 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 FAM118BQ9BPY3 351 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 C1QTNF2Q9BXJ5 285 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 C10orf88Q9H8K7 445 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 GLOD4Q9HC38 313 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 RXFP3Q9NSD7 469 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 R3HDM2Q9Y2K5 976 aaKnown RBP16.94■□□□□ 0.3
RPL28-209ENST00000560055 PPIL1Q9Y3C6 166 aa16.94■□□□□ 0.3
RPL28-209ENST00000560055 MED19A0JLT2 244 aaPredicted RBP16.93■□□□□ 0.3
RPL28-209ENST00000560055 IGLON5A6NGN9 336 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 CPP00450 1065 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 PRLP01236 227 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 PRKCGP05129 697 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 CFIP05156 583 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 PDHA1P08559 390 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 PRLRP16471 622 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 XPAP23025 273 aaPredicted RBP16.93■□□□□ 0.3
RPL28-209ENST00000560055 CD86P42081 329 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 BNC1Q01954 994 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 RALGDSQ12967 914 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
RPL28-209ENST00000560055 ERAP2Q6P179 960 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 DGLUCYQ7Z3D6 616 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 ZNF567Q8N184 647 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 C12orf50Q8NA57 414 aaPredicted RBP16.93■□□□□ 0.3
RPL28-209ENST00000560055 PDCD6IPQ8WUM4 868 aaKnown RBP16.93■□□□□ 0.3
RPL28-209ENST00000560055 ASB12Q8WXK4 309 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 KLK6Q92876 244 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 SERAC1Q96JX3 654 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 MCCC1Q96RQ3 725 aaPredicted RBP16.93■□□□□ 0.3
RPL28-209ENST00000560055 NUSAP1Q9BXS6 441 aaKnown RBP16.93■□□□□ 0.3
RPL28-209ENST00000560055 SLC17A9Q9BYT1 436 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 USP29Q9HBJ7 922 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 PHTF1Q9UMS5 762 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.93■□□□□ 0.32e-6■■■□□ 18.1
RPL28-209ENST00000560055 PLXNA2O75051 1894 aa16.93■□□□□ 0.3
RPL28-209ENST00000560055 A0A1W2PR77 199 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 CFAP69A5D8W1 941 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 PRAMEF26H0Y7S4 382 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 SLC31A1O15431 190 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 KIF5CO60282 957 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 LMNB2Q03252 620 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 ZNF569Q5MCW4 686 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 DPPA4Q7L190 304 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 SLC35F6Q8N357 371 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 CXorf40AQ8TE69 158 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 LENG8Q96PV6 779 aaPredicted RBP16.92■□□□□ 0.3
RPL28-209ENST00000560055 KLF6Q99612 283 aaPredicted RBP16.92■□□□□ 0.3
RPL28-209ENST00000560055 WRAP53Q9BUR4 548 aaKnown RBP16.92■□□□□ 0.3
RPL28-209ENST00000560055 FSCN3Q9NQT6 498 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 KLHL8Q9P2G9 620 aaPredicted RBP16.92■□□□□ 0.3
RPL28-209ENST00000560055 B4GALT6Q9UBX8 382 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 TRHDEQ9UKU6 1024 aa16.92■□□□□ 0.3
RPL28-209ENST00000560055 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 ENC1O14682 589 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 VILLO15195 856 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 MMP20O60882 483 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 ZNF189O75820 626 aaPredicted RBP16.91■□□□□ 0.3
RPL28-209ENST00000560055 PAK4O96013 591 aaPredicted RBP16.91■□□□□ 0.3
RPL28-209ENST00000560055 WNT1P04628 370 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 ENGP17813 658 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 HNRNPA2B1P22626 353 aaKnown RBP16.91■□□□□ 0.3
RPL28-209ENST00000560055 CA4P22748 312 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 CSNK1EP49674 416 aaKnown RBP16.91■□□□□ 0.3
RPL28-209ENST00000560055 RPL26P61254 145 aaKnown RBP16.91■□□□□ 0.3
RPL28-209ENST00000560055 FOXK2Q01167 660 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 SEMG2Q02383 582 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 GRIK2Q13002 908 aa16.91■□□□□ 0.3
RPL28-209ENST00000560055 SIX1Q15475 284 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms