RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 STK33Q9BYT3 514 aa12.45□□□□□ -0.42
TRPM1-210ENST00000559179 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
TRPM1-210ENST00000559179 CATSPERBQ9H7T0 1116 aa12.45□□□□□ -0.42
TRPM1-210ENST00000559179 SEPT11Q9NVA2 429 aaKnown RBP12.45□□□□□ -0.42
TRPM1-210ENST00000559179 DKK3Q9UBP4 350 aa12.45□□□□□ -0.42
TRPM1-210ENST00000559179 IL17BQ9UHF5 180 aa12.45□□□□□ -0.42
TRPM1-210ENST00000559179 DACH1Q9UI36 760 aa12.45□□□□□ -0.42
TRPM1-210ENST00000559179 SSUH2Q9Y2M2 353 aa12.45□□□□□ -0.42
TRPM1-210ENST00000559179 A0A1W2PQM1 296 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 B4DGG1 531 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 TPM2P07951 284 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 FAM87AP0C7U9 286 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 UCHL3P15374 230 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 DESP17661 470 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 ITIH1P19827 911 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 GPD1P21695 349 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 KELP23276 732 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 LIG3P49916 1009 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 SRSF6Q13247 344 aaKnown RBP12.44□□□□□ -0.42
TRPM1-210ENST00000559179 GRM3Q14832 879 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 UGP2Q16851 508 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 MAP9Q49MG5 647 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 INO80DQ53TQ3 878 aaPredicted RBP12.44□□□□□ -0.42
TRPM1-210ENST00000559179 STRADAQ7RTN6 431 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 BNIPLQ7Z465 357 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 VASH2Q86V25 355 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 ZFAND4Q86XD8 727 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 ZNF677Q86XU0 584 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 DNAAF5Q86Y56 855 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 JOSD2Q8TAC2 188 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 SLC20A1Q8WUM9 679 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 USP7Q93009 1102 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 TMEM159Q96B96 161 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
TRPM1-210ENST00000559179 SUV39H2Q9H5I1 410 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 PCDH12Q9NPG4 1184 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 LRIT1Q9P2V4 623 aa12.44□□□□□ -0.42
TRPM1-210ENST00000559179 UBA2Q9UBT2 640 aaPredicted RBP12.44□□□□□ -0.42
TRPM1-210ENST00000559179 ZNF462Q96JM2 2506 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 COL27A1Q8IZC6 1860 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 PRAMEF33A0A0G2JMD5 474 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 RASA4BC9J798 803 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 F8VZ95 297 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 NVLO15381 856 aaKnown RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 TEX33O43247 280 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 ZW10O43264 779 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 RASA4O43374 803 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 PRAMEF10O60809 474 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 ITGB2P05107 769 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 PRKCGP05129 697 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 GLB1P16278 677 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 CCKBRP32239 447 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 PTPN9P43378 593 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 NSFP46459 744 aaKnown RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 YBEYP58557 167 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 CDR2Q01850 454 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 LINC00303Q3SY05 128 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 AMZ1Q400G9 498 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 MANEALQ5VSG8 457 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 PYROXD2Q8N2H3 581 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 RTL3Q8N8U3 475 aaKnown RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 OR56A4Q8NGH8 313 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 EPS8L1Q8TE68 723 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 JPH3Q8WXH2 748 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 ZMYND15Q9H091 742 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 KLC2Q9H0B6 622 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 ADAM22Q9P0K1 906 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 MFHAS1Q9Y4C4 1052 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 RNF215Q9Y6U7 377 aa12.43□□□□□ -0.42
TRPM1-210ENST00000559179 FLNBO75369 2602 aaKnown RBP12.43□□□□□ -0.42
TRPM1-210ENST00000559179 KALRNO60229 2985 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 C2CD4BA6NLJ0 364 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 RHPN2P1A8MT19 583 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 A8MX80 341 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 DAPK3O43293 454 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 MMP8P22894 467 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 ALDH4A1P30038 563 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 MTM1Q13496 603 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 SERINC3Q13530 473 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 ACOX1Q15067 660 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 CYTH1Q15438 398 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 PARP15Q460N3 678 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 C14orf28Q4W4Y0 310 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 MIIPQ5JXC2 388 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 ARTNQ5T4W7 220 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 PIM3Q86V86 326 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 HCAR2Q8TDS4 363 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 PDXPQ96GD0 296 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 ZNF641Q96N77 438 aaPredicted RBP12.42□□□□□ -0.42
TRPM1-210ENST00000559179 RBM15Q96T37 977 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRPM1-210ENST00000559179 CYP4F12Q9HCS2 524 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 NLRC4Q9NPP4 1024 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 MRPL40Q9NQ50 206 aaKnown RBP12.42□□□□□ -0.42
TRPM1-210ENST00000559179 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 ATP8A1Q9Y2Q0 1164 aa12.42□□□□□ -0.42
TRPM1-210ENST00000559179 GOLGA6CA6NDK9 693 aa12.41□□□□□ -0.42
TRPM1-210ENST00000559179 GOLGA6BA6NDN3 693 aa12.41□□□□□ -0.42
TRPM1-210ENST00000559179 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms