RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MX1P20591 662 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SP100P23497 879 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 DNAJB1P25685 340 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CTSSP25774 331 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 MGAT1P26572 445 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 EEF1GP26641 437 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HSPA9P38646 679 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ADCYAP1R1P41586 468 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SLC1A1P43005 524 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 RGS7P49802 495 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 RPS8P62241 208 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GSTO1P78417 241 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 RELAQ04206 551 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 DHX34Q14147 1143 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 DLGAP5Q15398 846 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CCNG2Q16589 344 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 NFE2Q16621 373 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 NFIL3Q16649 462 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 LRRC26Q2I0M4 334 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ODF2Q5BJF6 829 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PPP6R3Q5H9R7 873 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CLVS2Q5SYC1 327 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 C9orf50Q5SZB4 431 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 TTC22Q5TAA0 569 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SHEQ5VZ18 495 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 TPGS2Q68CL5 300 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 KCTD16Q68DU8 428 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SNRNP48Q6IEG0 339 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 OR52E8Q6IFG1 317 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ANO7Q6IWH7 933 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 DUS1LQ6P1R4 473 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CEP85Q6P2H3 762 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 B3GNT6Q6ZMB0 384 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SPATA31D4Q6ZUB0 917 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 FRMD7Q6ZUT3 714 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 LPCAT2Q7L5N7 544 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF354CQ86Y25 554 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CDH26Q8IXH8 852 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 COLGALT2Q8IYK4 626 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 NATD1Q8N6N6 113 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 IPMKQ8NFU5 416 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 OR10Z1Q8NGY1 313 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 FBXO30Q8TB52 745 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HCAR2Q8TDS4 363 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ANKS1AQ92625 1134 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CIDECQ96AQ7 238 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CCDC127Q96BQ5 260 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 REXO5Q96IC2 774 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 TSNARE1Q96NA8 513 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ACAP3Q96P50 834 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PARK7Q99497 189 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 MPHOSPH8Q99549 860 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 C9orf16Q9BUW7 83 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 KIFC3Q9BVG8 833 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 TIPINQ9BVW5 301 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 TEX13BQ9BXU2 312 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 LMAN2LQ9H0V9 348 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 EPHX3Q9H6B9 360 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 FANCEQ9HB96 536 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 GID8Q9NWU2 228 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HPF1Q9NWY4 346 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 MRPL39Q9NYK5 338 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HACD3Q9P035 362 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CTTNBP2NLQ9P2B4 639 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 HSFX1Q9UBD0 423 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 KCNN3Q9UGI6 736 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 SCOCQ9UIL1 159 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 MED16Q9Y2X0 877 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CBY1Q9Y3M2 126 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 CHTOPQ9Y3Y2 248 aaKnown RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 STON1Q9Y6Q2 735 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 LOC285556D6RIA3 1793 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 ARHGEF17Q96PE2 2063 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-227ENST00000554491 DOCK1Q14185 1865 aa4.52□□□□□ -1.69
ATXN3-227ENST00000554491 PDS5AQ29RF7 1337 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 A0A1B0GWJ7 208 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 MAGEB16A2A368 324 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 DRGXA6NNA5 263 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PDHXO00330 501 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 TNPO2O14787 897 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 POLR2DO15514 142 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SPOPO43791 374 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 STX10O60499 249 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 NIPSNAP2O75323 286 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 GPC4O75487 556 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CLN5O75503 358 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CFIP05156 583 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 FYNP06241 537 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ATP5BP06576 529 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ELANEP08246 267 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CYP3A4P08684 503 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SNRPAP09012 282 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 STMN1P16949 149 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 TMEM11P17152 192 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 HOXA6P31267 233 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 RAD52P43351 418 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SULT1E1P49888 294 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 KRTAP10-11P60412 298 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CSNK2BP67870 215 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CCNA1P78396 465 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms