RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 IDH3AP50213 366 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 SCNN1BP51168 640 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 MAVSQ7Z434 540 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 SPATA6LQ8N4H0 392 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 ZNF781Q8N8C0 355 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 TDRD5Q8NAT2 981 aaKnown RBP17.16■□□□□ 0.34
PTPRO-209ENST00000543886 GIMAP7Q8NHV1 300 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 DNAJC1Q96KC8 554 aaKnown RBP17.16■□□□□ 0.34
PTPRO-209ENST00000543886 EXOC2Q96KP1 924 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 GPR78Q96P69 363 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTPRO-209ENST00000543886 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.16■□□□□ 0.34
PTPRO-209ENST00000543886 MAFFQ9ULX9 164 aa17.16■□□□□ 0.34
PTPRO-209ENST00000543886 PLXNA4Q9HCM2 1894 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 INSIG1O15503 277 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 DIAPH2O60879 1101 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 RPP40O75818 363 aaKnown RBP17.15■□□□□ 0.34
PTPRO-209ENST00000543886 LATS1O95835 1130 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 GLP2RO95838 553 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TIMP1P01033 207 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 PPM1AP35813 382 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 ACVR1Q04771 509 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 ILF2Q12905 390 aaKnown RBP17.15■□□□□ 0.34
PTPRO-209ENST00000543886 DLG1Q12959 904 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TUBB3Q13509 450 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 FAM83EQ2M2I3 478 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 HECTD2Q5U5R9 776 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 RINLQ6ZS11 566 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TMEM150AQ86TG1 271 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TREML1Q86YW5 311 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 HEXDCQ8WVB3 486 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 SCG3Q8WXD2 468 aaKnown RBP17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TBATAQ96M53 351 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 NUDCD1Q96RS6 583 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TRIB3Q96RU7 358 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 OLFM1Q99784 485 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 MIPEPQ99797 713 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 MRPL57Q9BQC6 102 aaKnown RBP17.15■□□□□ 0.34
PTPRO-209ENST00000543886 CCDC106Q9BWC9 280 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 ILKAPQ9H0C8 392 aaPredicted RBP17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
PTPRO-209ENST00000543886 TYW5A2RUC4 315 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 OR51F1A6NGY5 319 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 TARM1B6A8C7 271 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 WFS1O76024 890 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 C1RP00736 705 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 PIRTP0C851 137 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CES1P23141 567 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 RGRP47804 291 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CREMQ03060 361 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 USP4Q13107 963 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 UBAP2LQ14157 1087 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CSHL1Q14406 222 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 LRRC26Q2I0M4 334 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 PABPC1LQ4VXU2 614 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 WLSQ5T9L3 541 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 AGAP9Q5VTM2 703 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CXorf57Q6NSI4 855 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 MRNIPQ6NTE8 343 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 KLC3Q6P597 504 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 ZNF783Q6ZMS7 281 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 LDB1Q86U70 411 aaPredicted RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 FAM13CQ8NE31 585 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 MCUR1Q96AQ8 359 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 RMDN1Q96DB5 314 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CYP2S1Q96SQ9 504 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 UNKQ9C0B0 810 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 DRC3Q9H069 523 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 C11orf49Q9H6J7 331 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 ZNF334Q9HCZ1 680 aaPredicted RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 MARCH4Q9P2E8 410 aaPredicted RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 STOML2Q9UJZ1 356 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 ARIH1Q9Y4X5 557 aaPredicted RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 H0Y626 953 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 TEX28O15482 410 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 BUD23O43709 281 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 TBL1XO60907 577 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CRTAMO95727 393 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 S1PR4O95977 384 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 GOT2P00505 430 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 MYL4P12829 197 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CYTH1Q15438 398 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 RNF135Q8IUD6 432 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CARNMT1Q8N4J0 409 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 TEX9Q8N6V9 391 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 HJURPQ8NCD3 748 aaPredicted RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 ZNF333Q96JL9 665 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 ZFRQ96KR1 1074 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 CADM1Q9BY67 442 aaKnown RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
PTPRO-209ENST00000543886 GPAMQ9HCL2 828 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 IGSF5Q9NSI5 407 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 RIMKLBQ9ULI2 386 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 VWA7Q9Y334 891 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 RAP2CQ9Y3L5 183 aa17.14■□□□□ 0.33
PTPRO-209ENST00000543886 PRR5-ARHGAP8B1AHC4 643 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 SPECC1L-ADORA2AF8WAN1 911 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 ZNF195O14628 629 aa17.13■□□□□ 0.33
PTPRO-209ENST00000543886 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
PTPRO-209ENST00000543886 CD3EAPO15446 510 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms