RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ARMC3Q5W041 872 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 NDUFAF2Q8N183 169 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 TMIEQ8NEW7 156 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 BLOC1S5Q8TDH9 187 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
DDB1-221ENST00000543162 PIH1D2Q8WWB5 315 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 VOPP1Q96AW1 172 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 ECHDC3Q96DC8 303 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 SHDQ96IW2 340 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 KLHL32Q96NJ5 620 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 LRRC4CQ9HCJ2 640 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 ARHGEF3Q9NR81 526 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 WNT16Q9UBV4 365 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 NDRG2Q9UN36 371 aaKnown RBP10.74□□□□□ -0.69
DDB1-221ENST00000543162 SOX13Q9UN79 622 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 MRPS17Q9Y2R5 130 aaKnown RBP10.74□□□□□ -0.69
DDB1-221ENST00000543162 PRUNE2Q8WUY3 3088 aa10.74□□□□□ -0.69
DDB1-221ENST00000543162 TCF20Q9UGU0 1960 aaKnown RBP10.74□□□□□ -0.69
DDB1-221ENST00000543162 FAM237BA0A1B0GVD1 139 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 HEATR9A2RTY3 570 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SHISA7A6NL88 538 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 KPNA3O00505 521 aaPredicted RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 RNF40O75150 1001 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SPAG6O75602 509 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 POLBP06746 335 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 ABHD2P08910 425 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 GSTA2P09210 222 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 PIRTP0C851 137 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 CTPS1P17812 591 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SSTR1P30872 391 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SLC8A1P32418 973 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 PHBP35232 272 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 ABL2P42684 1182 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 GPX6P59796 221 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 POLR2LP62875 67 aaKnown RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 CAMK2GQ13555 558 aaPredicted RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 CCINQ13939 588 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SLC29A2Q14542 456 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 STARD3Q14849 445 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 ZNF805Q5CZA5 627 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 UBAP2Q5T6F2 1119 aaKnown RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 PKN3Q6P5Z2 889 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 BRAT1Q6PJG6 821 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 UNC5AQ6ZN44 842 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 C3orf62Q6ZUJ4 267 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 UBALD2Q8IYN6 164 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 IL17RCQ8NAC3 791 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 UHMK1Q8TAS1 419 aaKnown RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 PIP4K2CQ8TBX8 421 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 BRSK1Q8TDC3 778 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 HCAR2Q8TDS4 363 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SPOCK2Q92563 424 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 RANBP9Q96S59 729 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 FAM129BQ96TA1 746 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 GABRG3Q99928 467 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 KIFC1Q9BW19 673 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 FUT8Q9BYC5 575 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 EPB41L4BQ9H329 900 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 MRM3Q9HC36 420 aaKnown RBP10.73□□□□□ -0.69
DDB1-221ENST00000543162 CHRAC1Q9NRG0 131 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 ZNF446Q9NWS9 450 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.73□□□□□ -0.69
DDB1-221ENST00000543162 HACD3Q9P035 362 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 PPM1HQ9ULR3 514 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 PHTF1Q9UMS5 762 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 TCAF1Q9Y4C2 921 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 SPO11Q9Y5K1 396 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 RPS6KL1Q9Y6S9 549 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 ATG2BQ96BY7 2078 aa10.73□□□□□ -0.69
DDB1-221ENST00000543162 A0A087WUV0 522 aaPredicted RBP10.72□□□□□ -0.69
DDB1-221ENST00000543162 A0A0J9YYE9 177 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 TSPAN11A1L157 253 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 CCDC78A2IDD5 438 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 C1QTNF3-AMACRE9PGA6 284 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 RNASEH1O60930 286 aaKnown RBP10.72□□□□□ -0.69
DDB1-221ENST00000543162 USP1O94782 785 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 CRTAMO95727 393 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 IL1BP01584 269 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 TRBC1P01850 177 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 PRKCGP05129 697 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 HOXB2P14652 356 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 XPAP23025 273 aaPredicted RBP10.72□□□□□ -0.69
DDB1-221ENST00000543162 NFKBIAP25963 317 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 MSLNQ13421 630 aaPredicted RBP10.72□□□□□ -0.69
DDB1-221ENST00000543162 CRYMQ14894 314 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 POM121L1PQ3SYA9 428 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 HSF5Q4G112 596 aaPredicted RBP10.72□□□□□ -0.69
DDB1-221ENST00000543162 ANKRD20A4Q4UJ75 823 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 SPANXN3Q5MJ09 141 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 EOGTQ5NDL2 527 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 FAM46CQ5VWP2 391 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 ALS2CLQ60I27 953 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 STEAP4Q687X5 459 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 CES3Q6UWW8 571 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 USP45Q70EL2 814 aa10.72□□□□□ -0.69
DDB1-221ENST00000543162 NLRP9Q7RTR0 991 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms