RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 OR1E3Q8WZA6 343 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 GRAMD1AQ96CP6 724 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 APOOQ9BUR5 198 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 EDEM3Q9BZQ6 932 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 FGF22Q9HCT0 170 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 MRPL40Q9NQ50 206 aaKnown RBP15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 WDR70Q9NW82 654 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 SIK3Q9Y2K2 1263 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 TMEM202A6NGA9 273 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 PLD2O14939 933 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 CREB3O43889 395 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 KRT3P12035 628 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 WT1P19544 449 aaPredicted RBP15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 ITIH1P19827 911 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 MMP12P39900 470 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 ETV5P41161 510 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 LIG3P49916 1009 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 GSCP56915 257 aaPredicted RBP15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 RALGDSQ12967 914 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 KRT31Q15323 416 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 UGP2Q16851 508 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 CLEC16AQ2KHT3 1053 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 LINC00303Q3SY05 128 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 ESRP1Q6NXG1 681 aaKnown RBP15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 CCDC81Q6ZN84 652 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 MON1BQ7L1V2 547 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 SLFN11Q7Z7L1 901 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 CAMK1DQ8IU85 385 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 ARL14Q8N4G2 192 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 GLMNQ92990 594 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 MED8Q96G25 268 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 CELF6Q96J87 481 aaKnown RBP15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 LRRC19Q9H756 370 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 TMEM51Q9NW97 253 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 ADAM22Q9P0K1 906 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 FZD10Q9ULW2 581 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 GPR34Q9UPC5 381 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 UNC13CQ8NB66 2214 aa15.59■□□□□ 0.09
CLSTN3-213ENST00000541953 TLN1Q9Y490 2541 aaKnown RBP15.58■□□□□ 0.09
CLSTN3-213ENST00000541953 ZSCAN5CA6NGD5 496 aaPredicted RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 RIOK3O14730 519 aaKnown RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 SRP54P61011 504 aaKnown RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 NFKB2Q00653 900 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 CA9Q16790 459 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 INO80DQ53TQ3 878 aaPredicted RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 PPP1R15BQ5SWA1 713 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 CDKAL1Q5VV42 579 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 SCYL2Q6P3W7 929 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 ARHGAP36Q6ZRI8 547 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 RAB11FIP2Q7L804 512 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 FSTL5Q8N475 847 aaPredicted RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 FBXO39Q8N4B4 442 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 Q8N9G6 341 aaPredicted RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 C3orf20Q8ND61 904 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 GPR156Q8NFN8 814 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 CCL4L1Q8NHW4 92 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 MCEEQ96PE7 176 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 GFM1Q96RP9 751 aaKnown RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 CCNL2Q96S94 520 aaPredicted RBP15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 TRIM4Q9C037 500 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 SUV39H2Q9H5I1 410 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 RETREG1Q9H6L5 497 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 KLQ9UEF7 1012 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 DAAM1Q9Y4D1 1078 aa15.58■□□□□ 0.08
CLSTN3-213ENST00000541953 ARHGEF17Q96PE2 2063 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 WASH4PA8MWX3 477 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 RASGRP1O95267 797 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 CTSEP14091 401 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 EEF1GP26641 437 aaKnown RBP15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 PEX5P50542 639 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 INHBCP55103 352 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 ELOCQ15369 112 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 VASH2Q86V25 355 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 DNAAF5Q86Y56 855 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 PHF13Q86YI8 300 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 JAMLQ86YT9 394 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 TP53INP2Q8IXH6 220 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 UMODL1-AS1Q8N2C9 162 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 TSEN2Q8NCE0 465 aaKnown RBP15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 WDR92Q96MX6 357 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 RBM15Q96T37 977 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 NCAPGQ9BPX3 1015 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 SELENOOQ9BVL4 669 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 LGR4Q9BXB1 951 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 C1QTNF7Q9BXJ2 289 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 LRRN3Q9H3W5 708 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 FOXJ2Q9P0K8 574 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 UBA2Q9UBT2 640 aaPredicted RBP15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 PISDQ9UG56 409 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 DOLKQ9UPQ8 538 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 RNF215Q9Y6U7 377 aa15.57■□□□□ 0.08
CLSTN3-213ENST00000541953 SLC28A2O43868 658 aa15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 ALPIP09923 528 aa15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 NSFP46459 744 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 ZNF143P52747 638 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 RAD51Q06609 339 aa15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 ELP6Q0PNE2 266 aa15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 PARP15Q460N3 678 aa15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 EFHC2Q5JST6 749 aa15.56■□□□□ 0.08
CLSTN3-213ENST00000541953 CERCAMQ5T4B2 595 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms