RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ENGP17813 658 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CETN2P41208 172 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CD86P42081 329 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ATP5OP48047 213 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 EIF3EP60228 445 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RPS21P63220 83 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RACK1P63244 317 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SIX1Q15475 284 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 TMEM52BQ4KMG9 183 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CFAP58Q5T655 872 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CCDC181Q5TID7 509 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 KIAA1161Q6NSJ0 714 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 KDM7AQ6ZMT4 941 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ZNF567Q8N184 647 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 OR2I1PQ8NGU4 316 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SPATA22Q8NHS9 363 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CEP76Q8TAP6 659 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 PDCD6IPQ8WUM4 868 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 UBE2Q2Q8WVN8 375 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 PIH1D2Q8WWB5 315 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 HTR3CQ8WXA8 447 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 IMP4Q96G21 291 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 FEM1CQ96JP0 617 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 TEKT5Q96M29 485 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RBM15Q96T37 977 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 KLF6Q99612 283 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GORASP1Q9BQQ3 440 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 WRAP53Q9BUR4 548 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 NUSAP1Q9BXS6 441 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 TDRD1Q9BXT4 1180 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CARD9Q9H257 536 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SLC6A14Q9UN76 642 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RAI2Q9Y5P3 530 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GVINP1Q7Z2Y8 2422 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SCN8AQ9UQD0 1980 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 LAMA1P25391 3075 aa11.39□□□□□ -0.59
TNFRSF1A-208ENST00000536194 NPIPB15A6NHN6 443 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 A8MX80 341 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 PRR5-ARHGAP8B1AHC4 643 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 H0Y8X5 98 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 NEMP1O14524 444 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ZSCAN12O43309 604 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 MTSS1O43312 755 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 PAK4O96013 591 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 MT-CYBP00156 380 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GM2AP17900 193 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 NFKB1P19838 968 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 LHCGRP22888 699 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 XPAP23025 273 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CES1P23141 567 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CXCR5P32302 372 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GRIA4P48058 902 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SUOXP51687 545 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 AFF3P51826 1226 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 FAM193AP78312 1265 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ELP6Q0PNE2 266 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GRIK2Q13002 908 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 AASDHQ4L235 1098 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SETMARQ53H47 684 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ZNF569Q5MCW4 686 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ARMC12Q5T9G4 340 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SEL1L2Q5TEA6 688 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 NAPEPLDQ6IQ20 393 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 LIPIQ6XZB0 460 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GCNT7Q6ZNI0 430 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 DPPA4Q7L190 304 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 RABEPKQ7Z6M1 372 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ADAT2Q7Z6V5 191 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SLC13A5Q86YT5 568 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SLC35F6Q8N357 371 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 C12orf50Q8NA57 414 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SLC35B2Q8TB61 432 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ATG4AQ8WYN0 398 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 MCCC1Q96RQ3 725 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 TRIB3Q96RU7 358 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 EDEM2Q9BV94 578 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SLC17A9Q9BYT1 436 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 SLC25A51Q9H1U9 297 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 USP29Q9HBJ7 922 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 GLOD4Q9HC38 313 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 AASDHPPTQ9NRN7 309 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 B4GALT6Q9UBX8 382 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 DMTF1Q9Y222 760 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 COQ6Q9Y2Z9 468 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 PPIL1Q9Y3C6 166 aa11.38□□□□□ -0.59
TNFRSF1A-208ENST00000536194 MYLKQ15746 1914 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 F5H423 210 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 PRAMEF26H0Y7S4 382 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ARHGAP33O14559 1287 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 VILLO15195 856 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 ALPIP09923 528 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 C6P13671 934 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 CTPS1P17812 591 aa11.37□□□□□ -0.59
TNFRSF1A-208ENST00000536194 HNRNPA2B1P22626 353 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms