RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 USP24Q9UPU5 2620 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 TP53BP1Q12888 1972 aaPredicted RBP9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ENC1O14682 589 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 FPGTO14772 594 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 MFSD11O43934 449 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 MAFKO60675 156 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 TM7SF2O76062 418 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 DKK1O94907 266 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 LDOC1O95751 146 aaPredicted RBP9.38□□□□□ -0.91
ZNF250-209ENST00000533543 SERPINA4P29622 427 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 MAN1A1P33908 653 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 SERPINB6P35237 376 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 IGFALSP35858 605 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 RABIFP47224 123 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 CSNK1DP48730 415 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 SCNN1BP51168 640 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 RENBPP51606 427 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 TERF1P54274 439 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 BCL2L1Q07817 233 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ELP6Q0PNE2 266 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 DNAJC3Q13217 504 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 PDE1CQ14123 709 aaPredicted RBP9.38□□□□□ -0.91
ZNF250-209ENST00000533543 FZD2Q14332 565 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ZNF235Q14590 738 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 MESDQ14696 234 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 UGP2Q16851 508 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 TMEM52BQ4KMG9 183 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 TPRG1LQ5T0D9 272 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ERAP2Q6P179 960 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 BRAT1Q6PJG6 821 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 PAF1Q8N7H5 531 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 KCTD6Q8NC69 237 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 DENND6BQ8NEG7 585 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 PCDH19Q8TAB3 1148 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 SLC35G2Q8TBE7 412 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 FAM174AQ8TBP5 190 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 FAM71BQ8TC56 605 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 HCAR2Q8TDS4 363 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ASB12Q8WXK4 309 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 GATA6Q92908 595 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ZNF599Q96NL3 588 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 LENG8Q96PV6 779 aaPredicted RBP9.38□□□□□ -0.91
ZNF250-209ENST00000533543 PSKH2Q96QS6 385 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ATP13A3Q9H7F0 1226 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 GPR27Q9NS67 375 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 UCKL1Q9NWZ5 548 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 DNAJC28Q9NX36 388 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 RCOR3Q9P2K3 495 aaPredicted RBP9.38□□□□□ -0.91
ZNF250-209ENST00000533543 ATP8A1Q9Y2Q0 1164 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 COQ6Q9Y2Z9 468 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 MSRB2Q9Y3D2 182 aa9.38□□□□□ -0.91
ZNF250-209ENST00000533543 TRIM38O00635 465 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
ZNF250-209ENST00000533543 FFAR2O15552 330 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 PIAS2O75928 621 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 MAP3K6O95382 1288 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 PROS1P07225 676 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 KRT7P08729 469 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 C6P13671 934 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 DGKAP23743 735 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 MMP12P39900 470 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 SUOXP51687 545 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 PFN3P60673 137 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 MAXP61244 160 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 AP1S1P61966 158 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 NSUN2Q08J23 767 aaKnown RBP eCLIP9.37□□□□□ -0.91
ZNF250-209ENST00000533543 PDK2Q15119 407 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 IRF4Q15306 451 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 ST3GAL2Q16842 350 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 ZFYVE27Q5T4F4 411 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 NCBP2-AS2Q69YL0 99 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 MARCH9Q86YJ5 346 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 DCP2Q8IU60 420 aaKnown RBP9.37□□□□□ -0.91
ZNF250-209ENST00000533543 SLC25A45Q8N413 288 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 PGBD5Q8N414 524 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 TC2NQ8N9U0 490 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 TP53I13Q8NBR0 393 aaPredicted RBP9.37□□□□□ -0.91
ZNF250-209ENST00000533543 NSMCE1Q8WV22 266 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 RAPGEF5Q92565 580 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 ECHDC3Q96DC8 303 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 ZNF670Q9BS34 389 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 C1QTNF7Q9BXJ2 289 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 MBNL1Q9NR56 388 aaKnown RBP9.37□□□□□ -0.91
ZNF250-209ENST00000533543 LCMT1Q9UIC8 334 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 AKAP13Q12802 2813 aa9.37□□□□□ -0.91
ZNF250-209ENST00000533543 SPTY2D1-AS1A0A0U1RR47 76 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 FAM221BA6H8Z2 402 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 SIGLEC6O43699 453 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 LZTS3O60299 673 aaPredicted RBP9.36□□□□□ -0.91
ZNF250-209ENST00000533543 MTA2O94776 668 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 PTMAP06454 111 aaKnown RBP9.36□□□□□ -0.91
ZNF250-209ENST00000533543 CR2P20023 1033 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 HSPA9P38646 679 aaKnown RBP9.36□□□□□ -0.91
ZNF250-209ENST00000533543 GARSP41250 739 aaKnown RBP9.36□□□□□ -0.91
ZNF250-209ENST00000533543 MMP13P45452 471 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 ACADVLP49748 655 aa9.36□□□□□ -0.91
ZNF250-209ENST00000533543 LIG3P49916 1009 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms