RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 BUB1O43683 1085 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 TNFP01375 233 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 RPLP0P05388 317 aaKnown RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 CELA2BP08218 269 aaPredicted RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 UNGP13051 313 aaPredicted RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 CTSEP14091 401 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 STAT1P42224 750 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 GPR3P46089 330 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 MTIF2P46199 727 aaKnown RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 HDAC4P56524 1084 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 CDR2Q01850 454 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 TRA2AQ13595 282 aaKnown RBP eCLIP8.58□□□□□ -1.04
SPARC-204ENST00000521569 INPP5AQ14642 412 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 ZSCAN23Q3MJ62 389 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 ATXN7L2Q5T6C5 722 aaPredicted RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 AFMIDQ63HM1 303 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 RWDD4Q6NW29 188 aaKnown RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 ERAP2Q6P179 960 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 TRIM72Q6ZMU5 477 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 SPRED1Q7Z699 444 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 HID1Q8IV36 788 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 ZSCAN1Q8NBB4 408 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 OR6K2Q8NGY2 324 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 GPBAR1Q8TDU6 330 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 RXFP2Q8WXD0 754 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 ECHDC3Q96DC8 303 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 WDR92Q96MX6 357 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 EIF3CQ99613 913 aaKnown RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 TUBGCP2Q9BSJ2 902 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 FAM117AQ9C073 453 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 CDH19Q9H159 772 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 SLC25A18Q9H1K4 315 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 PDCL3Q9H2J4 239 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 PCDH12Q9NPG4 1184 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 KLQ9UEF7 1012 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 DNAI1Q9UI46 699 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 DOLKQ9UPQ8 538 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 LOXL2Q9Y4K0 774 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 HEMK1Q9Y5R4 338 aaPredicted RBP8.58□□□□□ -1.04
SPARC-204ENST00000521569 FHOD1Q9Y613 1164 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 DOCK9Q9BZ29 2069 aa8.58□□□□□ -1.04
SPARC-204ENST00000521569 RP1P56715 2156 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 TCRBV5S1A1TA0A578 114 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CLEC18AA5D8T8 446 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 SIGLEC16A6NMB1 481 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 C9orf172C9J069 976 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 RASA4BC9J798 803 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PDE2AO00408 941 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 CASC3O15234 703 aaKnown RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 FGF10O15520 208 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 RASA4O43374 803 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 BUB1BO60566 1050 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 MMEP08473 750 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 JMJD7P0C870 316 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PNMA6AP0CW24 399 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 KRT3P12035 628 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 KELP23276 732 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 TEAD1P28347 426 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 LIG3P49916 1009 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 JAM2P57087 298 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 ATP11AP98196 1134 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 B4GALNT1Q00973 533 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 FMO1Q01740 532 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 NFATC3Q12968 1075 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PTP4A2Q12974 167 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PEX6Q13608 980 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CYTH1Q15438 398 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 TBR1Q16650 682 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 TSR1Q2NL82 804 aaKnown RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 C14orf28Q4W4Y0 310 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 TMEM164Q5U3C3 297 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CRTC1Q6UUV9 634 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 ENPP7Q6UWV6 458 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CLEC18BQ6UXF7 455 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 ZNF574Q6ZN55 896 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 SLFN11Q7Z7L1 901 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PHF13Q86YI8 300 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 EMC1Q8N766 993 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CLEC18CQ8NCF0 446 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 OR56A4Q8NGH8 313 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 KIAA1524Q8TCG1 905 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 TSACCQ96A04 125 aaPredicted RBP8.57□□□□□ -1.04
SPARC-204ENST00000521569 DPYSL5Q9BPU6 564 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.57□□□□□ -1.04
SPARC-204ENST00000521569 FOXP3Q9BZS1 431 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 LRRC19Q9H756 370 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CATSPERBQ9H7T0 1116 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PDFQ9HBH1 243 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 PDP2Q9P2J9 529 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 GULP1Q9UBP9 304 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 LHX3Q9UBR4 397 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 ATP8A1Q9Y2Q0 1164 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 RELNP78509 3460 aa8.57□□□□□ -1.04
SPARC-204ENST00000521569 CHD5Q8TDI0 1954 aa8.56□□□□□ -1.04
SPARC-204ENST00000521569 GOLGA8SH3BPF8 625 aa8.56□□□□□ -1.04
SPARC-204ENST00000521569 STMND1H3BQB6 276 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms