RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 ATP8A1Q9Y2Q0 1164 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 DUSP10Q9Y6W6 482 aa16.25■□□□□ 0.19
PDLIM5-212ENST00000509333 ACACBO00763 2458 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 SPTY2D1-AS1A0A0U1RR47 76 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 A6NNZ2 444 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 ATXN1LP0C7T5 689 aaKnown RBP16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 CCNB1P14635 433 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 MX2P20592 715 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 CES1P23141 567 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 EPHA8P29322 1005 aaPredicted RBP16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 CDC25BP30305 580 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 RABIFP47224 123 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 RALGDSQ12967 914 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 FZD2Q14332 565 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 AGERQ15109 404 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 TPRG1LQ5T0D9 272 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 ERAP2Q6P179 960 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 LIPIQ6XZB0 460 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 KYAT3Q6YP21 454 aaKnown RBP16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 KDM7AQ6ZMT4 941 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 TMEM139Q8IV31 216 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 TP53I13Q8NBR0 393 aaPredicted RBP16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 TPCN2Q8NHX9 752 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 ARRDC2Q8TBH0 407 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 SEMA3CQ99985 751 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 ANP32EQ9BTT0 268 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 LACRTQ9GZZ8 138 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 TOR4AQ9NXH8 423 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 AMACRQ9UHK6 382 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 PPIL1Q9Y3C6 166 aa16.24■□□□□ 0.19
PDLIM5-212ENST00000509333 A0A1W2PQ67 120 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 PJA2O43164 708 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 TNFSF14O43557 240 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 SPOPO43791 374 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 DKK1O94907 266 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 FTH1P19P0C7X4 201 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 MMP12P39900 470 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 CDKN2BP42772 138 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 YPEL5P62699 121 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 TRAF2Q12933 501 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 FOXC1Q12948 553 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 WSCD2Q2TBF2 565 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 ZNF542PQ5EBM4 170 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 CFAP58Q5T655 872 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 ALG1LQ6GMV1 187 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 TIGD7Q6NT04 549 aaPredicted RBP16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 RCOR2Q8IZ40 523 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 EID2Q8N6I1 236 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 PNPLA1Q8N8W4 532 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 CCNYQ8ND76 341 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 PIH1D2Q8WWB5 315 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 HDAC11Q96DB2 347 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 LGMNQ99538 433 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 BAG1Q99933 345 aaPredicted RBP16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 KLF15Q9UIH9 416 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 ANGPTL2Q9UKU9 493 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 PHTF1Q9UMS5 762 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 COQ6Q9Y2Z9 468 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 HEY1Q9Y5J3 304 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 TDRD6O60522 2096 aaKnown RBP16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 CHD8Q9HCK8 2581 aa16.23■□□□□ 0.19
PDLIM5-212ENST00000509333 FAM221BA6H8Z2 402 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 BTNL10A8MVZ5 291 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 A8MX80 341 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 LZTS3O60299 673 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 FZD6O60353 706 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 SOCS5O75159 536 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 ZRANB2O95218 330 aaKnown RBP eCLIP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 PGLSO95336 258 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 TRIM16O95361 564 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 JCHAINP01591 159 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 C6P13671 934 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 ZFXP17010 805 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 GM2AP17900 193 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 DGKAP23743 735 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 IGFALSP35858 605 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 PPIDQ08752 370 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 ITKQ08881 620 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 NIPAL4Q0D2K0 466 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 EIF2B5Q13144 721 aaKnown RBP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 LRRC14Q15048 493 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 DPPA4Q7L190 304 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 PTAR1Q7Z6K3 402 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 RAB44Q7Z6P3 723 aaPredicted RBP16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 CCDC13Q8IYE1 715 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 CHCHD4Q8N4Q1 142 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 CNTD1Q8N815 330 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 SPC24Q8NBT2 197 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 ADAMTS14Q8WXS8 1223 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 SCRN2Q96FV2 425 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 IL12RB2Q99665 862 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 C1QTNF7Q9BXJ2 289 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 UCKL1Q9NWZ5 548 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 RAI2Q9Y5P3 530 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 SHROOM3Q8TF72 1996 aa16.22■□□□□ 0.19
PDLIM5-212ENST00000509333 CEP295Q9C0D2 2601 aa16.21■□□□□ 0.19
PDLIM5-212ENST00000509333 TOR1BO14657 336 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms