RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 MPP1Q00013 466 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 IRF9Q00978 393 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 TAF1AQ15573 450 aaPredicted RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 ZRSR2Q15696 482 aaKnown RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 DLG2Q15700 870 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 TYSND1Q2T9J0 566 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 AARS2Q5JTZ9 985 aaKnown RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CES4AQ5XG92 561 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 RFWD3Q6PCD5 774 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 FBXO46Q6PJ61 603 aaPredicted RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 AFTPHQ6ULP2 937 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 ZCCHC23Q6ZST2 131 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CIR1Q86X95 450 aaPredicted RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 SLC41A1Q8IVJ1 513 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CFAP52Q8N1V2 620 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CPXM2Q8N436 756 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 FSTL5Q8N475 847 aaPredicted RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 TMEM151AQ8N4L1 468 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.29□□□□□ -0.92
HTT-205ENST00000509043 GPATCH11Q8N954 259 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 DCAF4L2Q8NA75 395 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 OR6P1Q8NGX9 317 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 MRPS31Q92665 395 aaKnown RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 VWCEQ96DN2 955 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CMTM5Q96DZ9 223 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CNDP1Q96KN2 507 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 UBXN10Q96LJ8 280 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 GPR78Q96P69 363 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 ASB2Q96Q27 587 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 GCNAQ96QF7 691 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 YME1L1Q96TA2 773 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 OMDQ99983 421 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 SPON2Q9BUD6 331 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CCDC106Q9BWC9 280 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 C20orf27Q9GZN8 174 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 NMUR2Q9GZQ4 415 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 MUC3BQ9H195 1237 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 EML4Q9HC35 981 aaKnown RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 FBXO6Q9NRD1 293 aaPredicted RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 ARL8BQ9NVJ2 186 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 NLE1Q9NVX2 485 aaPredicted RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 MRPL42Q9Y6G3 142 aaKnown RBP9.29□□□□□ -0.92
HTT-205ENST00000509043 COMMD10Q9Y6G5 202 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 SCN5AQ14524 2016 aa9.29□□□□□ -0.92
HTT-205ENST00000509043 CHD5Q8TDI0 1954 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 A0A0D9SEW6 157 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 TRPC5OSA6NMA1 111 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 H0Y626 953 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 GOLGA8TH3BQL2 631 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 MATN2O00339 956 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 ZNF195O14628 629 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 HGSO14964 777 aaPredicted RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 MUSKO15146 869 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 HDAC3O15379 428 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 CD3EAPO15446 510 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 PHGDHO43175 533 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 ITM2AO43736 263 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 LUC7L3O95232 432 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 S1PR4O95977 384 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 ADH1AP07327 375 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 KITP10721 976 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 EZRP15311 586 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 DDX6P26196 483 aaKnown RBP eCLIP9.28□□□□□ -0.92
HTT-205ENST00000509043 GRIA4P48058 902 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 CSNK1DP48730 415 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 IDH3AP50213 366 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 RPL14P50914 215 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 STC1P52823 247 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 RPS24P62847 133 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 IRX1P78414 480 aaPredicted RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 SMAD3P84022 425 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 NFKB2Q00653 900 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 PFKPQ01813 784 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 SATB1Q01826 763 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 TUBB3Q13509 450 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 HECTD2Q5U5R9 776 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 RNF219Q5W0B1 726 aaPredicted RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 SEL1L3Q68CR1 1132 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 CXorf57Q6NSI4 855 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 RETSATQ6NUM9 610 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 EPGNQ6UW88 154 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 Q6ZNB5 142 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 HTR3DQ70Z44 454 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 KDELC2Q7Z4H8 507 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 ALYREFQ86V81 257 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 LONP2Q86WA8 852 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 TNS4Q8IZW8 715 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 ELMOD1Q8N336 334 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 KIF2BQ8N4N8 673 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 TEX9Q8N6V9 391 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 ZNF557Q8N988 423 aaPredicted RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 TDRD5Q8NAT2 981 aaKnown RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 ZNF784Q8NCA9 323 aaPredicted RBP9.28□□□□□ -0.92
HTT-205ENST00000509043 OR7D4Q8NG98 312 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 OR4L1Q8NH43 312 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 KCTD4Q8WVF5 259 aa9.28□□□□□ -0.92
HTT-205ENST00000509043 HDAC10Q969S8 669 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms