RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GPR179Q6PRD1 2367 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 ANKRD36A6QL64 1941 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 TRPM6Q9BX84 2022 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 PTPRZ1P23471 2315 aaPredicted RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 GOLGA6L10A0A0M3HER8 536 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 A0A1W2PQU0 124 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TOR1BO14657 336 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 AREL1O15033 823 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 KCNN4O15554 427 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 CEP104O60308 925 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 DFNA5O60443 496 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 ANXA9O76027 345 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TM7SF2O76062 418 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 CFIP05156 583 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 IGHV4-34P06331 123 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 ELFN1P0C7U0 828 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TIMP2P16035 220 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 ZNF30P17039 623 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TCP1P17987 556 aaKnown RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 HNRNPA2B1P22626 353 aaKnown RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 CD86P42081 329 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 METAP1P53582 386 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 C21orf59P57076 290 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TAS2R38P59533 333 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 FAM193AP78312 1265 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 DSC2Q02487 901 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 ZBTB17Q13105 803 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 MPP3Q13368 585 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 ARHGEF7Q14155 803 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 STAT4Q14765 748 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 HS1BP3Q53T59 392 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TRIM61Q5EBN2 209 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 SLC23A3Q6PIS1 610 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 C4orf22Q6V702 233 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 PID1Q7Z2X4 250 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 IQCHQ86VS3 1027 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 RAVER1Q8IY67 606 aaKnown RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 SLC35F6Q8N357 371 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 IFT43Q96FT9 208 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 IMP4Q96G21 291 aaKnown RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 SPATA13Q96N96 652 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 FSD1LQ9BXM9 530 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 TDRD1Q9BXT4 1180 aaKnown RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 GLOD4Q9HC38 313 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 PCDH9Q9HC56 1237 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 PCDH12Q9NPG4 1184 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 AASDHPPTQ9NRN7 309 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 SEMA4GQ9NTN9 838 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 FAM153AQ9UHL3 310 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 RSPH14Q9UHP6 348 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 SLC6A14Q9UN76 642 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 AAR2Q9Y312 384 aaKnown RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 PCDHGC4Q9Y5F7 938 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.94
NUP54-207ENST00000508583 PI4KAP42356 2102 aa9.2□□□□□ -0.94
NUP54-207ENST00000508583 EP300Q09472 2414 aaPredicted RBP9.2□□□□□ -0.94
NUP54-207ENST00000508583 TNRC6BQ9UPQ9 1833 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 CTAGE9A4FU28 777 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 PSMD11O00231 422 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 PGRMC1O00264 195 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 PLK4O00444 970 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ENC1O14682 589 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 LZTS3O60299 673 aaPredicted RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 CER1O95813 267 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 EPOP01588 193 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 FGGP02679 453 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 RBL1P28749 1068 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 CD38P28907 300 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 MAT2AP31153 395 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 VIPR1P32241 457 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 MMP12P39900 470 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ABL2P42684 1182 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 GEMP55040 296 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 GNG11P61952 73 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 PPP2CBP62714 309 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 PPP2CAP67775 309 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ARHGAP8P85298 464 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 SPEM2Q0P670 501 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 WASHC5Q12768 1159 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 TRAF2Q12933 501 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 CCNG2Q16589 344 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 LONRF2Q1L5Z9 754 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ZNF284Q2VY69 593 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 TMEM52BQ4KMG9 183 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 AASDHQ4L235 1098 aaPredicted RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 AADACL2Q6P093 401 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 DRICH1Q6PGQ1 229 aaPredicted RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 PRR23CQ6ZRP0 262 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ARHGEF18Q6ZSZ5 1173 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 DPPA4Q7L190 304 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ALYREFQ86V81 257 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 DCP2Q8IU60 420 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 ZCCHC9Q8N567 271 aaKnown RBP9.19□□□□□ -0.94
NUP54-207ENST00000508583 OXR1Q8N573 874 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 CCDC89Q8N998 374 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 SLC35B2Q8TB61 432 aa9.19□□□□□ -0.94
NUP54-207ENST00000508583 ARRDC2Q8TBH0 407 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms