RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MAP9Q49MG5 647 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SYTL3Q4VX76 610 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 HYIQ5T013 277 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TMEM268Q5VZI3 342 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TYW3Q6IPR3 259 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 ABRAXAS1Q6UWZ7 409 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SYNE3Q6ZMZ3 975 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 NEK10Q6ZWH5 1172 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 RUFY3Q7L099 469 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRMT1LQ7Z2T5 733 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 PATL1Q86TB9 770 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 GATAD2AQ86YP4 633 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 ERC1Q8IUD2 1116 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SUGP1Q8IWZ8 645 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 KRT222Q8N1A0 295 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPATA20Q8TB22 786 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 BRSK1Q8TDC3 778 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 AFAP1L1Q8TED9 768 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TMEM18Q96B42 140 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 VMP1Q96GC9 406 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SCMH1Q96GD3 660 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC39A13Q96H72 371 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC34Q96HJ3 373 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TBATAQ96M53 351 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPAG5Q96R06 1193 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SERINC2Q96SA4 455 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 NAP1L3Q99457 506 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 MPHOSPH6Q99547 160 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 CRACR2AQ9BSW2 395 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TCHPQ9BT92 498 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SARGQ9BW04 601 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 CADM1Q9BY67 442 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM31Q9BZY9 425 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 XPO4Q9C0E2 1151 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 LHPPQ9H008 270 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 MMP28Q9H239 520 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TP63Q9H3D4 680 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 PDE11AQ9HCR9 933 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 IRAK4Q9NWZ3 460 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 HDAC6Q9UBN7 1215 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 CTNNA3Q9UI47 895 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 BLOC1S6Q9UL45 172 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 RABL2BQ9UNT1 228 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 OSGIN2Q9Y236 505 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TCF19Q9Y242 345 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC45A1Q9Y2W3 748 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 PCDHA10Q9Y5I2 948 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 LRRFIP2Q9Y608 721 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 NFS1Q9Y697 457 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SCAPERQ9BY12 1400 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 RNF123Q5XPI4 1314 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 MST1RQ04912 1400 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 A0A1B0GVM2 712 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ERICH4A6NGS2 130 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 EFCAB8A8MWE9 144 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 APAF1O14727 1248 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PMM2O15305 246 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 P4HA2O15460 535 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCNT1O60563 726 aaKnown RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PLA2G6O60733 806 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 BAIAP3O94812 1187 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SMC2O95347 1197 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CLDN7O95471 211 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 DDAH2O95865 285 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MYL1P05976 194 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MYL3P08590 195 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFC1BP0CG36 223 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFC1P0CG37 223 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CKMT1AP12532 417 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM27P14373 513 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CD9P21926 228 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 DGKAP23743 735 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 NF2P35240 595 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 GNL1P36915 607 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 GNALP38405 381 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 TPD52P55327 224 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 UBXN2AP68543 259 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PHEXP78562 749 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ARL16Q0P5N6 197 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC173Q0VFZ6 552 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 DLG1Q12959 904 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 IKQ13123 557 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PDE1CQ14123 709 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MORC3Q14149 939 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SIM2Q14190 667 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CTTNQ14247 550 aaKnown RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLMAPQ14BN4 828 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PTPN14Q15678 1187 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CLPPQ16740 277 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MPEG1Q2M385 716 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 GXYLT1Q4G148 440 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 C14orf177Q52M58 125 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ALFQ53S48 1182 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPDYCQ5MJ68 293 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 WDR45BQ5MNZ6 344 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MFSD4BQ5TF39 518 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SPATA1Q5VX52 437 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 IZUMO3Q5VZ72 239 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAAH2Q6GMR7 532 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 GDPD4Q6W3E5 623 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms